MGE detailed information
MGE type: IScluster/Tn MGE length: 40273 bp
Accession: NZ_CP097832 Location: 113419..153691 Organism: Shigella flexneri strain D Replicon: plasmid unnamed2
Accession: NZ_CP097832 Location: 113419..153691 Organism: Shigella flexneri strain D Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9381_RS23440 (M9381_23445) | 108958..109194 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| M9381_RS23445 (M9381_23450) | 109411..110340 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| M9381_RS23450 (M9381_23455) | 111287..112066 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| M9381_RS23455 (M9381_23460) | 112256..113072 | - | 817 | Protein_133 | IS110 family transposase | - |
| M9381_RS23460 (M9381_23465) | 113419..114423 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| M9381_RS23465 (M9381_23470) | 114615..115811 | + | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9381_RS23470 (M9381_23475) | 115861..116698 | - | 838 | Protein_136 | IS21 family transposase ISEc62 | Transposase |
| M9381_RS23475 (M9381_23480) | 116681..117022 | - | 342 | Protein_137 | IS21 family transposase ISEc62 | Transposase |
| M9381_RS23480 (M9381_23485) | 117137..117940 | - | 804 | Protein_138 | IS3 family transposase ISKpn38 | Transposase |
| M9381_RS23485 (M9381_23490) | 117981..119045 | - | 1065 | Protein_139 | IS3 family transposase IS600 | Transposase |
| M9381_RS23490 (M9381_23495) | 119383..120837 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| M9381_RS23495 (M9381_23500) | 121409..122083 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS23500 (M9381_23505) | 122080..122430 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS23505 (M9381_23510) | 122427..124028 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS23510 (M9381_23515) | 124282..124446 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| M9381_RS23515 (M9381_23520) | 125348..125632 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| M9381_RS23520 (M9381_23525) | 125620..126105 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| M9381_RS23525 (M9381_23530) | 126278..126559 | - | 282 | Protein_147 | IS4 family transposase ISSfl1 | Transposase |
| M9381_RS23530 (M9381_23535) | 126626..127782 | + | 1157 | WP_134796931.1 | IS3 family transposase IS600 | Transposase |
| M9381_RS23535 (M9381_23540) | 127896..129124 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| M9381_RS23540 (M9381_23545) | 129162..129305 | + | 144 | Protein_150 | DUF3440 domain-containing protein | - |
| M9381_RS23545 (M9381_23550) | 129290..129928 | + | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| M9381_RS23550 (M9381_23555) | 130156..130580 | + | 425 | Protein_152 | hypothetical protein | - |
| M9381_RS23555 (M9381_23560) | 130575..131771 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9381_RS23560 (M9381_23565) | 132022..132495 | + | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| M9381_RS23565 (M9381_23570) | 132584..133449 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| M9381_RS23570 | 133486..133617 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| M9381_RS23575 (M9381_23575) | 133699..133892 | + | 194 | Protein_157 | HNH endonuclease signature motif containing protein | - |
| M9381_RS23580 (M9381_23580) | 134035..134256 | + | 222 | Protein_158 | IS66 family transposase ISCro1 | Transposase |
| M9381_RS23585 (M9381_23585) | 134277..134339 | - | 63 | Protein_159 | IS66 family transposase ISCro1 | Transposase |
| M9381_RS23590 (M9381_23590) | 134789..136201 | + | 1413 | WP_010921643.1 | hypothetical protein | VF |
| M9381_RS23595 (M9381_23595) | 136305..136454 | - | 150 | Protein_161 | IS1 family transposase | - |
| M9381_RS23600 (M9381_23600) | 136530..138227 | + | 1698 | WP_010921642.1 | hypothetical protein | VF |
| M9381_RS23605 (M9381_23605) | 138344..138463 | + | 120 | Protein_163 | IS66 family transposase ISCro1 | Transposase |
| M9381_RS23610 (M9381_23610) | 138630..138902 | + | 273 | WP_258249732.1 | hypothetical protein | - |
| M9381_RS23615 (M9381_23615) | 138883..140090 | + | 1208 | WP_094096874.1 | IS91 family transposase ISSbo1 | Transposase |
| M9381_RS23620 (M9381_23620) | 140466..141182 | - | 717 | Protein_166 | IS21 family transposase IS100kyp | Transposase |
| M9381_RS23625 (M9381_23625) | 141380..142588 | + | 1209 | Protein_167 | IS3 family transposase | - |
| M9381_RS23630 (M9381_23630) | 142691..143188 | + | 498 | Protein_168 | IS66 family transposase ISEc47 | Transposase |
| M9381_RS23635 (M9381_23635) | 143229..143420 | + | 192 | Protein_169 | IS21 family transposase IS100 | Transposase |
| M9381_RS23640 (M9381_23640) | 143514..143723 | - | 210 | Protein_170 | peptidoglycan-binding protein | - |
| M9381_RS23645 (M9381_23645) | 143773..145137 | - | 1365 | WP_000051932.1 | MFS transporter | - |
| M9381_RS23650 (M9381_23650) | 145335..145541 | - | 207 | WP_001145604.1 | hypothetical protein | - |
| M9381_RS23655 (M9381_23655) | 145885..146097 | + | 213 | Protein_173 | DDE-type integrase/transposase/recombinase | - |
| M9381_RS23660 (M9381_23660) | 146141..147349 | - | 1209 | Protein_174 | IS3 family transposase | - |
| M9381_RS23665 (M9381_23665) | 147401..149125 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| M9381_RS23670 (M9381_23670) | 149553..151250 | - | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| M9381_RS23675 (M9381_23675) | 151579..151758 | + | 180 | Protein_177 | transposase | - |
| M9381_RS23685 (M9381_23685) | 152660..153691 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| M9381_RS23690 (M9381_23690) | 153806..153934 | - | 129 | Protein_180 | IS5/IS1182 family transposase | - |
| M9381_RS23700 (M9381_23700) | 155314..155502 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|