MGE detailed information
MGE type: Prophage MGE length: 54307 bp
Accession: NZ_CP097721 Location: 2251877..2306183 Organism: Escherichia coli strain MS1665 Replicon: chromosome
Accession: NZ_CP097721 Location: 2251877..2306183 Organism: Escherichia coli strain MS1665 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9O79_RS10890 (2248126) | 2248126..2250552 | - | 2427 | WP_267320638.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| M9O79_RS10895 (2250751) | 2250751..2251056 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| M9O79_RS10900 (2251164) | 2251164..2251874 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| M9O79_RS10905 (2251877) | 2251877..2252437 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| M9O79_RS10910 (2252472) | 2252472..2252813 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| M9O79_RS10915 (2252948) | 2252948..2253274 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| M9O79_RS10920 (2253480) | 2253480..2254694 | + | 1215 | WP_001296944.1 | starvation-sensing protein RspA | - |
| M9O79_RS10925 (2254706) | 2254706..2255725 | + | 1020 | WP_000836082.1 | Zn-dependent oxidoreductase | - |
| M9O79_RS10930 (2255913) | 2255913..2257193 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M9O79_RS10935 (2257228) | 2257228..2257479 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| M9O79_RS10940 (2257552) | 2257552..2260023 | - | 2472 | WP_000048342.1 | exonuclease | - |
| M9O79_RS10945 (2260116) | 2260116..2260307 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| M9O79_RS10950 (2260304) | 2260304..2260492 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| M9O79_RS10955 (2261060) | 2261060..2261278 | - | 219 | WP_001171942.1 | protein YdfC | - |
| M9O79_RS10960 (2261308) | 2261308..2261436 | - | 129 | WP_000344964.1 | protein YdfB | - |
| M9O79_RS10965 (2261438) | 2261438..2261593 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| M9O79_RS10970 (2261760) | 2261760..2262167 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| M9O79_RS10975 (2262251) | 2262251..2262481 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| M9O79_RS10980 (2262465) | 2262465..2262986 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| M9O79_RS10985 (2262967) | 2262967..2263932 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| M9O79_RS10990 (2263973) | 2263973..2264395 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| M9O79_RS10995 (2264392) | 2264392..2264881 | + | 490 | Protein_2147 | class I SAM-dependent methyltransferase | - |
| M9O79_RS11000 (2265359) | 2265359..2265780 | + | 422 | Protein_2148 | hypothetical protein | - |
| M9O79_RS11005 (2266436) | 2266436..2267458 | + | 1023 | Protein_2149 | ISNCY family transposase ISCARN112 | Transposase |
| M9O79_RS11010 (2267579) | 2267579..2267728 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| M9O79_RS11015 (2268165) | 2268165..2268497 | - | 333 | WP_267320639.1 | FlxA-like family protein | - |
| M9O79_RS11020 (2268700) | 2268700..2269005 | - | 306 | WP_001326990.1 | protein YdfV | - |
| M9O79_RS11025 (2269030) | 2269030..2269269 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M9O79_RS11030 (2269269) | 2269269..2269556 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M9O79_RS11035 (2269628) | 2269628..2269783 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M9O79_RS11040 (2270000) | 2270000..2270251 | + | 252 | WP_000980994.1 | protein Rem | - |
| M9O79_RS11045 (2270318) | 2270318..2270596 | + | 279 | WP_267320640.1 | hypothetical protein | - |
| M9O79_RS11050 (2270598) | 2270598..2271647 | + | 1050 | WP_001422934.1 | DUF968 domain-containing protein | - |
| M9O79_RS11055 (2271661) | 2271661..2272413 | + | 753 | WP_001047135.1 | antitermination protein | - |
| M9O79_RS11060 (2272691) | 2272691..2272780 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| M9O79_RS11065 (2272835) | 2272835..2273047 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| M9O79_RS11070 (2273348) | 2273348..2273563 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| M9O79_RS11075 (2273927) | 2273927..2274097 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| M9O79_RS11080 (2274317) | 2274317..2274532 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| M9O79_RS11085 (2274537) | 2274537..2274848 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| M9O79_RS11090 (2274845) | 2274845..2275378 | + | 534 | WP_001092971.1 | lysozyme | - |
| M9O79_RS11095 (2275375) | 2275375..2275872 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| M9O79_RS11100 (2276235) | 2276235..2276447 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| M9O79_RS11105 (2276458) | 2276458..2276646 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| M9O79_RS11110 (2276649) | 2276649..2276714 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| M9O79_RS11115 (2276794) | 2276794..2276949 | + | 156 | WP_001309517.1 | protein YnfN | - |
| M9O79_RS11120 (2277121) | 2277121..2277294 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| M9O79_RS11125 (2277446) | 2277446..2277856 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| M9O79_RS11130 (2277914) | 2277914..2278147 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| M9O79_RS11135 (2278536) | 2278536..2279081 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| M9O79_RS11140 (2279056) | 2279056..2280985 | + | 1930 | Protein_2176 | phage terminase large subunit family protein | - |
| M9O79_RS11145 (2280982) | 2280982..2281188 | + | 207 | WP_000198149.1 | gpW family protein | - |
| M9O79_RS11150 (2281185) | 2281185..2282786 | + | 1602 | WP_001345555.1 | phage portal protein | - |
| M9O79_RS11155 (2282767) | 2282767..2284086 | + | 1320 | WP_000123317.1 | S49 family peptidase | - |
| M9O79_RS11160 (2284096) | 2284096..2284428 | + | 333 | WP_001358225.1 | head decoration protein | - |
| M9O79_RS11165 (2284484) | 2284484..2285509 | + | 1026 | WP_000063250.1 | major capsid protein | - |
| M9O79_RS11170 (2285551) | 2285551..2285946 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| M9O79_RS11175 (2285958) | 2285958..2286188 | + | 231 | Protein_2183 | head-tail joining protein | - |
| M9O79_RS11185 (2287441) | 2287441..2287572 | + | 132 | Protein_2185 | head-tail joining protein | - |
| M9O79_RS11190 (2287584) | 2287584..2288162 | + | 579 | WP_000975081.1 | phage tail protein | - |
| M9O79_RS11195 (2288159) | 2288159..2288554 | + | 396 | WP_000683125.1 | phage minor tail U family protein | - |
| M9O79_RS11200 (2288562) | 2288562..2289302 | + | 741 | WP_001543784.1 | phage tail protein | - |
| M9O79_RS11205 (2289318) | 2289318..2289740 | + | 423 | WP_000479135.1 | phage minor tail protein G | - |
| M9O79_RS11210 (2289722) | 2289722..2290156 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| M9O79_RS11215 (2290149) | 2290149..2292728 | + | 2580 | WP_042972482.1 | phage tail tape measure protein | - |
| M9O79_RS11220 (2292725) | 2292725..2293054 | + | 330 | WP_000847331.1 | phage tail protein | - |
| M9O79_RS11225 (2293054) | 2293054..2293752 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| M9O79_RS11230 (2293758) | 2293758..2294501 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| M9O79_RS11235 (2294498) | 2294498..2295070 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| M9O79_RS11240 (2295131) | 2295131..2298610 | + | 3480 | WP_207516323.1 | host specificity protein J | - |
| M9O79_RS11245 (2298678) | 2298678..2299277 | + | 600 | WP_040075703.1 | Outer membrane protein X | VF |
| M9O79_RS11250 (2299342) | 2299342..2302302 | + | 2961 | WP_072320446.1 | phage tail protein | - |
| M9O79_RS11255 (2302302) | 2302302..2302877 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| M9O79_RS11260 (2302975) | 2302975..2303564 | - | 590 | Protein_2200 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M9O79_RS11265 (2303881) | 2303881..2304114 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| M9O79_RS11270 (2304183) | 2304183..2304296 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| M9O79_RS11275 (2304900) | 2304900..2306183 | + | 1284 | Protein_2203 | MHS family MFS transporter YdfJ | - |
| M9O79_RS11280 (2306272) | 2306272..2307732 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| M9O79_RS11285 (2307768) | 2307768..2307971 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M9O79_RS11290 (2308149) | 2308149..2308835 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| M9O79_RS11295 (2308924) | 2308924..2309670 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|