MGE detailed information
MGE type: Prophage MGE length: 23828 bp
Accession: NZ_CP097529 Location: 4671091..4694918 Organism: Pseudomonas putida strain KT2440 isolate pSEVA631 Replicon: chromosome
Accession: NZ_CP097529 Location: 4671091..4694918 Organism: Pseudomonas putida strain KT2440 isolate pSEVA631 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8Z99_RS21625 (M8Z99_21600) | 4666097..4667950 | + | 1854 | WP_010954903.1 | NADH-quinone oxidoreductase subunit L | - |
| M8Z99_RS21630 (M8Z99_21605) | 4667991..4669523 | + | 1533 | WP_010954904.1 | NADH-quinone oxidoreductase subunit M | - |
| M8Z99_RS21635 (M8Z99_21610) | 4669531..4671000 | + | 1470 | WP_010954905.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| M8Z99_RS21640 (M8Z99_21615) | 4671091..4671354 | - | 264 | WP_010954906.1 | ogr/Delta-like zinc finger family protein | - |
| M8Z99_RS21645 (M8Z99_21620) | 4671534..4671911 | + | 378 | WP_010954907.1 | helix-turn-helix domain-containing protein | - |
| M8Z99_RS21650 (M8Z99_21625) | 4671908..4672270 | - | 363 | WP_010954908.1 | hypothetical protein | - |
| M8Z99_RS21655 (M8Z99_21630) | 4672263..4672610 | - | 348 | WP_010954909.1 | head completion/stabilization protein | - |
| M8Z99_RS21660 (M8Z99_21635) | 4672622..4672870 | - | 249 | WP_003251454.1 | Transcriptional activator protein LasR | VF |
| M8Z99_RS21665 (M8Z99_21640) | 4673091..4675163 | + | 2073 | WP_010954910.1 | TonB-dependent receptor | - |
| M8Z99_RS21670 (M8Z99_21645) | 4675267..4675827 | - | 561 | WP_003251456.1 | class I chromate reductase ChrR | - |
| M8Z99_RS21675 (M8Z99_21650) | 4675984..4676202 | + | 219 | WP_010954911.1 | hypothetical protein | - |
| M8Z99_RS21680 (M8Z99_21655) | 4676186..4678435 | - | 2250 | WP_049588234.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M8Z99_RS21685 (M8Z99_21660) | 4678563..4679321 | - | 759 | WP_010954912.1 | DNA polymerase III subunit epsilon | - |
| M8Z99_RS21690 (M8Z99_21665) | 4679372..4679818 | - | 447 | WP_003251460.1 | ribonuclease HI | - |
| M8Z99_RS21695 (M8Z99_21670) | 4679834..4680607 | - | 774 | WP_003251461.1 | methyltransferase domain-containing protein | - |
| M8Z99_RS21700 (M8Z99_21675) | 4680693..4681472 | + | 780 | WP_010954914.1 | hydroxyacylglutathione hydrolase | - |
| M8Z99_RS21705 (M8Z99_21680) | 4681573..4683003 | + | 1431 | WP_010954915.1 | Membrane-bound lytic murein transglycosylase D | VF |
| M8Z99_RS21710 (M8Z99_21685) | 4683224..4685053 | + | 1830 | WP_010954916.1 | extracellular solute-binding protein | - |
| M8Z99_RS21715 (M8Z99_21690) | 4685050..4686885 | + | 1836 | WP_010954917.1 | extracellular solute-binding protein | - |
| M8Z99_RS21720 (M8Z99_21695) | 4686887..4687960 | + | 1074 | WP_010954918.1 | microcin C ABC transporter permease YejB | - |
| M8Z99_RS21725 (M8Z99_21700) | 4687962..4688981 | + | 1020 | WP_010954919.1 | ABC transporter permease | - |
| M8Z99_RS21730 (M8Z99_21705) | 4688983..4690587 | + | 1605 | WP_010954920.1 | putative ABC transporter ATP-binding protein YejF | VF |
| M8Z99_RS21735 (M8Z99_21710) | 4690735..4691202 | + | 468 | WP_049588231.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| M8Z99_RS21740 (M8Z99_21715) | 4691199..4691774 | + | 576 | WP_010954922.1 | PIN domain-containing protein | Toxin Detail |
| M8Z99_RS21745 (M8Z99_21720) | 4691988..4694918 | + | 2931 | WP_049588229.1 | aminotransferase | - |
| M8Z99_RS21750 (M8Z99_21725) | 4694922..4696145 | - | 1224 | WP_010954925.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| M8Z99_RS21755 (M8Z99_21730) | 4696236..4697141 | + | 906 | WP_010954926.1 | LysR family transcriptional regulator | - |
| M8Z99_RS21760 (M8Z99_21735) | 4697203..4697898 | - | 696 | WP_010954927.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA313, TA20571 | NC_002947 | 4671229..4695056 | 0 |