MGE detailed information
MGE type: Conjugative plasmid MGE length: 56145 bp
Accession: NZ_CP097492 Location: 1..56145 Organism: Pseudomonas sp. BYT-5 Replicon: plasmid pBYT5-3
Accession: NZ_CP097492 Location: 1..56145 Organism: Pseudomonas sp. BYT-5 Replicon: plasmid pBYT5-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M6G63_RS27760 (M6G63_27760) | 1..429 | + | 429 | WP_001095942.1 | antirestriction protein | - |
| M6G63_RS27765 (M6G63_27765) | 481..1686 | + | 1206 | WP_011405605.1 | protein KlcB | - |
| M6G63_RS27770 (M6G63_27770) | 1703..1960 | + | 258 | WP_011117141.1 | transcriptional repressor KorC | - |
| M6G63_RS27775 (M6G63_27775) | 2120..2356 | + | 237 | WP_000041932.1 | stable inheritance protein KleA | - |
| M6G63_RS27780 (M6G63_27780) | 2415..2630 | + | 216 | WP_010890114.1 | DUF2688 domain-containing protein | - |
| M6G63_RS27785 (M6G63_27785) | 2775..3104 | + | 330 | WP_010890113.1 | KleE stable inheritance protein | - |
| M6G63_RS27790 (M6G63_27790) | 3106..3636 | + | 531 | WP_011117143.1 | DUF2761 domain-containing protein | - |
| M6G63_RS27795 (M6G63_27795) | 3750..4052 | + | 303 | WP_010890110.1 | transcriptional regulator KorA | - |
| M6G63_RS27800 (M6G63_27800) | 4049..4813 | + | 765 | WP_000855329.1 | ParA family protein | - |
| M6G63_RS27805 (M6G63_27805) | 4810..5859 | + | 1050 | WP_011114060.1 | ParB/RepB/Spo0J family partition protein | - |
| M6G63_RS27810 (M6G63_27810) | 6039..7070 | + | 1032 | WP_011117145.1 | DNA-binding protein | - |
| M6G63_RS27815 (M6G63_27815) | 7241..7588 | + | 348 | WP_000664557.1 | hypothetical protein | - |
| M6G63_RS27820 (M6G63_27820) | 7617..8270 | + | 654 | WP_000826922.1 | hypothetical protein | - |
| M6G63_RS27825 (M6G63_27825) | 8473..8913 | - | 441 | WP_000718516.1 | conjugal transfer protein TraM | - |
| M6G63_RS27830 (M6G63_27830) | 8913..9638 | - | 726 | WP_001062597.1 | AAA family ATPase | - |
| M6G63_RS27835 (M6G63_27835) | 9638..10036 | - | 399 | WP_001127128.1 | TraK family protein | - |
| M6G63_RS27840 (M6G63_27840) | 10410..10784 | + | 375 | WP_000426567.1 | conjugal transfer transcriptional regulator TraJ | - |
| M6G63_RS27845 (M6G63_27845) | 10819..13059 | + | 2241 | WP_011117146.1 | Protein TraI | Relaxase |
| M6G63_RS27850 (M6G63_27850) | 13056..14969 | + | 1914 | WP_000694765.1 | Conjugal transfer protein TraG | VF |
| M6G63_RS27855 (M6G63_27855) | 14966..15502 | + | 537 | WP_006122512.1 | conjugative transfer signal peptidase TraF | - |
| M6G63_RS27860 (M6G63_27860) | 15514..17577 | + | 2064 | WP_011114056.1 | DNA topoisomerase III | - |
| M6G63_RS27865 (M6G63_27865) | 17599..17988 | + | 390 | WP_006122510.1 | protein TraD | - |
| M6G63_RS27870 (M6G63_27870) | 17992..22338 | + | 4347 | WP_011117147.1 | zincin-like metallopeptidase domain-containing protein | - |
| M6G63_RS27875 (M6G63_27875) | 22629..25544 | + | 2916 | WP_250036157.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| M6G63_RS27880 (M6G63_27880) | 25688..26281 | + | 594 | Protein_24 | FAD-dependent oxidoreductase | - |
| M6G63_RS27885 (M6G63_27885) | 26390..27937 | + | 1548 | WP_076205821.1 | IS91 family transposase ISPps1 | Transposase |
| M6G63_RS27890 (M6G63_27890) | 28103..28771 | + | 669 | WP_237306186.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| M6G63_RS27895 (M6G63_27895) | 28838..29269 | - | 432 | WP_005797960.1 | EamA family transporter | - |
| M6G63_RS27900 (M6G63_27900) | 29298..30650 | - | 1353 | WP_029310059.1 | Swarming motility regulation sensor protein RssA | VF |
| M6G63_RS27905 (M6G63_27905) | 30626..31291 | - | 666 | WP_005797956.1 | Transcriptional regulatory protein QseB | VF |
| M6G63_RS27910 (M6G63_27910) | 31314..32072 | - | 759 | WP_011875625.1 | membrane protein | - |
| M6G63_RS27915 (M6G63_27915) | 32082..32531 | - | 450 | WP_076205818.1 | hypothetical protein | - |
| M6G63_RS27920 (M6G63_27920) | 32561..33343 | - | 783 | WP_005797951.1 | membrane protein | - |
| M6G63_RS27925 (M6G63_27925) | 33414..34010 | - | 597 | WP_011517526.1 | undecaprenyl-diphosphatase | - |
| M6G63_RS27930 (M6G63_27930) | 34067..34402 | - | 336 | WP_005797945.1 | PepSY domain-containing protein | - |
| M6G63_RS27935 (M6G63_27935) | 34723..35103 | - | 381 | WP_250036155.1 | hypothetical protein | - |
| M6G63_RS27940 (M6G63_27940) | 35100..35663 | - | 564 | WP_021561445.1 | Tn3 family transposase ISPsy42 | Transposase |
| M6G63_RS27945 (M6G63_27945) | 35899..36219 | - | 321 | WP_021561444.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| M6G63_RS27950 (M6G63_27950) | 36219..36434 | - | 216 | WP_021561443.1 | antitoxin MazE family protein | Antitoxin Detail |
| M6G63_RS27955 (M6G63_27955) | 36723..37478 | + | 756 | WP_232476757.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| M6G63_RS27960 (M6G63_27960) | 37480..38154 | - | 675 | WP_011178411.1 | DNA methylase | - |
| M6G63_RS27965 (M6G63_27965) | 38309..38740 | - | 432 | WP_001665065.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| M6G63_RS27970 (M6G63_27970) | 38756..39454 | - | 699 | WP_011114053.1 | TraX family protein | - |
| M6G63_RS27975 (M6G63_27975) | 39454..39720 | - | 267 | WP_010890140.1 | hypothetical protein | - |
| M6G63_RS27980 (M6G63_27980) | 39749..40384 | - | 636 | WP_011114052.1 | hypothetical protein | VF |
| M6G63_RS27985 (M6G63_27985) | 40398..40985 | - | 588 | WP_010890138.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| M6G63_RS27990 (M6G63_27990) | 41003..42721 | - | 1719 | WP_011114051.1 | P-type conjugative transfer protein TrbL | - |
| M6G63_RS27995 (M6G63_27995) | 42732..42959 | - | 228 | WP_000644148.1 | entry exclusion lipoprotein TrbK | - |
| M6G63_RS28000 (M6G63_28000) | 42969..43733 | - | 765 | WP_010890135.1 | P-type conjugative transfer protein TrbJ | - |
| M6G63_RS28005 (M6G63_28005) | 43754..45175 | - | 1422 | WP_011114050.1 | Type IV secretion system protein virB10 | VF |
| M6G63_RS28010 (M6G63_28010) | 45180..45668 | - | 489 | WP_006122479.1 | conjugal transfer protein TrbH | - |
| M6G63_RS28015 (M6G63_28015) | 45671..46570 | - | 900 | WP_006122480.1 | P-type conjugative transfer protein TrbG | - |
| M6G63_RS28020 (M6G63_28020) | 46588..47370 | - | 783 | WP_006122481.1 | conjugal transfer protein TrbF | - |
| M6G63_RS28025 (M6G63_28025) | 47367..49925 | - | 2559 | WP_011114047.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| M6G63_RS28030 (M6G63_28030) | 49922..50233 | - | 312 | WP_001207961.1 | conjugal transfer protein TrbD | - |
| M6G63_RS28035 (M6G63_28035) | 50237..50701 | - | 465 | WP_011114046.1 | conjugal transfer system pilin TrbC | - |
| M6G63_RS28040 (M6G63_28040) | 50718..51680 | - | 963 | WP_000132020.1 | Type IV secretion system protein PtlH | VF |
| M6G63_RS28045 (M6G63_28045) | 51990..52352 | - | 363 | WP_010890126.1 | transcriptional regulator | - |
| M6G63_RS28050 (M6G63_28050) | 52466..52807 | + | 342 | WP_000019167.1 | single-stranded DNA-binding protein | - |
| M6G63_RS28055 (M6G63_28055) | 52854..54074 | + | 1221 | WP_011114072.1 | plasmid replication initiator TrfA | - |
| M6G63_RS28060 (M6G63_28060) | 55397..55711 | - | 315 | WP_011117139.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M6G63_RS28065 (M6G63_28065) | 55708..55977 | - | 270 | WP_001260984.1 | type II toxin-antitoxin system ParD family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|