MGE detailed information
MGE type: Prophage MGE length: 38255 bp
Accession: NZ_CP097430 Location: 2231536..2269790 Organism: Escherichia coli strain C288 Replicon: chromosome
Accession: NZ_CP097430 Location: 2231536..2269790 Organism: Escherichia coli strain C288 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8Y68_RS10795 (2227435) | 2227435..2228655 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| M8Y68_RS10800 (2228780) | 2228780..2229475 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| M8Y68_RS10805 (2229428) | 2229428..2230720 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| M8Y68_RS10810 (2230879) | 2230879..2231493 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| M8Y68_RS10815 (2231536) | 2231536..2232390 | - | 855 | WP_049254808.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| M8Y68_RS10820 (2232392) | 2232392..2233009 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| M8Y68_RS10825 (2233020) | 2233020..2235443 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| M8Y68_RS10830 (2235504) | 2235504..2237930 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| M8Y68_RS10835 (2238129) | 2238129..2238434 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| M8Y68_RS10840 (2238542) | 2238542..2239252 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| M8Y68_RS10845 (2239255) | 2239255..2239815 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| M8Y68_RS10850 (2239850) | 2239850..2240191 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| M8Y68_RS10855 (2240326) | 2240326..2240652 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| M8Y68_RS10860 (2240858) | 2240858..2242072 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| M8Y68_RS10865 (2242084) | 2242084..2243103 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| M8Y68_RS10870 (2243291) | 2243291..2244571 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M8Y68_RS10875 (2244606) | 2244606..2244857 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| M8Y68_RS10880 (2244930) | 2244930..2246639 | - | 1710 | Protein_2132 | 3'-5' exoribonuclease | - |
| M8Y68_RS10885 (2246627) | 2246627..2246884 | + | 258 | Protein_2133 | hypothetical protein | - |
| M8Y68_RS10890 (2246925) | 2246925..2247347 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| M8Y68_RS10895 (2247344) | 2247344..2247833 | + | 490 | Protein_2135 | class I SAM-dependent methyltransferase | - |
| M8Y68_RS10900 (2248216) | 2248216..2249755 | - | 1540 | Protein_2136 | IS66 family transposase ISEc22 | Transposase |
| M8Y68_RS10905 (2249804) | 2249804..2250034 | - | 231 | Protein_2137 | IS66 family insertion sequence element accessory protein TnpB | - |
| M8Y68_RS10910 (2250040) | 2250040..2250162 | - | 123 | Protein_2138 | IS66 family transposase ISEc22 | Transposase |
| M8Y68_RS10915 (2250405) | 2250405..2250826 | + | 422 | Protein_2139 | hypothetical protein | - |
| M8Y68_RS10920 (2251482) | 2251482..2252504 | + | 1023 | Protein_2140 | ISNCY family transposase ISCARN112 | Transposase |
| M8Y68_RS10925 (2252625) | 2252625..2252774 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| M8Y68_RS10930 (2253211) | 2253211..2253543 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| M8Y68_RS10935 (2253746) | 2253746..2254051 | - | 306 | WP_001326990.1 | protein YdfV | - |
| M8Y68_RS10940 (2254076) | 2254076..2254315 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M8Y68_RS10945 (2254315) | 2254315..2254602 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M8Y68_RS10950 (2254674) | 2254674..2254829 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M8Y68_RS10955 (2255046) | 2255046..2255297 | + | 252 | WP_000980994.1 | protein Rem | - |
| M8Y68_RS10960 (2255364) | 2255364..2255642 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| M8Y68_RS10965 (2255644) | 2255644..2256693 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| M8Y68_RS10970 (2256707) | 2256707..2257459 | + | 753 | WP_001047135.1 | antitermination protein | - |
| M8Y68_RS10975 (2257737) | 2257737..2257826 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| M8Y68_RS10980 (2257881) | 2257881..2258093 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| M8Y68_RS10985 (2258394) | 2258394..2258609 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| M8Y68_RS10990 (2258973) | 2258973..2259143 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| M8Y68_RS10995 (2259363) | 2259363..2259578 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| M8Y68_RS11000 (2259583) | 2259583..2259894 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| M8Y68_RS11005 (2259891) | 2259891..2260424 | + | 534 | WP_001092971.1 | lysozyme | - |
| M8Y68_RS11010 (2260421) | 2260421..2260918 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| M8Y68_RS11015 (2261281) | 2261281..2261493 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| M8Y68_RS11020 (2261504) | 2261504..2261692 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| M8Y68_RS11025 (2261695) | 2261695..2261760 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| M8Y68_RS11030 (2261765) | 2261765..2261995 | + | 231 | WP_000720962.1 | protein YnfN | - |
| M8Y68_RS11035 (2262167) | 2262167..2262340 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| M8Y68_RS11040 (2262492) | 2262492..2262902 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| M8Y68_RS11045 (2262960) | 2262960..2263193 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| M8Y68_RS11050 (2263582) | 2263582..2264127 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| M8Y68_RS11055 (2264102) | 2264102..2265907 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| M8Y68_RS11060 (2265907) | 2265907..2266482 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| M8Y68_RS11065 (2266580) | 2266580..2267170 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M8Y68_RS11070 (2267487) | 2267487..2267720 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| M8Y68_RS11075 (2267789) | 2267789..2267902 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| M8Y68_RS11080 (2268423) | 2268423..2269790 | + | 1368 | Protein_2172 | MHS family MFS transporter | - |
| M8Y68_RS11085 (2269879) | 2269879..2271339 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| M8Y68_RS11090 (2271374) | 2271374..2271577 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M8Y68_RS11095 (2271754) | 2271754..2272440 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| M8Y68_RS11100 (2272529) | 2272529..2273275 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|