MGE detailed information
MGE type: Conjugative plasmid MGE length: 80851 bp
Accession: NZ_CP096977 Location: 1..80851 Organism: Escherichia coli strain 17-07187 Replicon: plasmid p17-07187_1
Accession: NZ_CP096977 Location: 1..80851 Organism: Escherichia coli strain 17-07187 Replicon: plasmid p17-07187_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2894_RS25085 (M2894_25085) | 2807..3625 | - | 819 | WP_072107751.1 | conjugal transfer protein TraT | - |
| M2894_RS26515 | 3540..3791 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| M2894_RS25095 (M2894_25095) | 3848..4246 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| M2894_RS25100 (M2894_25100) | 4293..4823 | - | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| M2894_RS25105 (M2894_25105) | 4820..5533 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| M2894_RS25110 (M2894_25110) | 5530..6867 | - | 1338 | WP_001272017.1 | conjugal transfer protein TraO | - |
| M2894_RS25115 (M2894_25115) | 6871..7845 | - | 975 | WP_000547385.1 | hypothetical protein | VF |
| M2894_RS25120 (M2894_25120) | 7856..8551 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| M2894_RS25125 (M2894_25125) | 8563..8913 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| M2894_RS25130 (M2894_25130) | 8930..12991 | - | 4062 | WP_170888018.1 | DUF5710 domain-containing protein | - |
| M2894_RS25135 (M2894_25135) | 13055..13345 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| M2894_RS25140 (M2894_25140) | 13342..14490 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| M2894_RS25145 (M2894_25145) | 14474..15310 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| M2894_RS25150 (M2894_25150) | 15307..15765 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| M2894_RS25155 (M2894_25155) | 15869..17071 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| M2894_RS25160 (M2894_25160) | 17173..17994 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| M2894_RS25165 (M2894_25165) | 18159..18353 | - | 195 | Protein_17 | integrase | - |
| M2894_RS25170 (M2894_25170) | 18467..19828 | - | 1362 | WP_025715295.1 | hypothetical protein | VF |
| M2894_RS25175 (M2894_25175) | 19846..20472 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| M2894_RS25180 (M2894_25180) | 20488..20973 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| M2894_RS25185 (M2894_25185) | 21018..21554 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| M2894_RS25190 (M2894_25190) | 21616..22710 | - | 1095 | WP_001401770.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| M2894_RS25195 (M2894_25195) | 22712..24220 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| M2894_RS25200 (M2894_25200) | 24324..24783 | - | 460 | Protein_24 | type IV pilus biogenesis protein PilP | - |
| M2894_RS25205 (M2894_25205) | 24773..26068 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| M2894_RS25210 (M2894_25210) | 26089..27708 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| M2894_RS25215 (M2894_25215) | 27740..28177 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| M2894_RS25220 (M2894_25220) | 28181..29251 | - | 1071 | WP_000730428.1 | hypothetical protein | VF |
| M2894_RS25225 (M2894_25225) | 29478..29813 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| M2894_RS25230 (M2894_25230) | 29929..30171 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| M2894_RS25235 (M2894_25235) | 30252..31946 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| M2894_RS25240 (M2894_25240) | 31973..32593 | - | 621 | WP_000176498.1 | DUF1449 family protein | - |
| M2894_RS25245 (M2894_25245) | 32860..33522 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| M2894_RS25250 (M2894_25250) | 33663..34169 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
| M2894_RS25255 (M2894_25255) | 35005..36036 | + | 1032 | WP_000907881.1 | plasmid replication initiator RepA | - |
| M2894_RS25260 (M2894_25260) | 36734..36918 | + | 185 | Protein_36 | hypothetical protein | - |
| M2894_RS25265 (M2894_25265) | 36942..37226 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M2894_RS25270 (M2894_25270) | 37226..37501 | + | 276 | WP_000421256.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M2894_RS25275 (M2894_25275) | 37607..37810 | + | 204 | Protein_39 | hypothetical protein | - |
| M2894_RS25280 (M2894_25280) | 38079..38345 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| M2894_RS25285 (M2894_25285) | 38345..38821 | - | 477 | WP_001401995.1 | hypothetical protein | - |
| M2894_RS25290 (M2894_25290) | 38877..39479 | - | 603 | WP_170891835.1 | ProQ/FINO family protein | - |
| M2894_RS25295 (M2894_25295) | 39833..41179 | + | 1347 | WP_001132021.1 | protein YagA | - |
| M2894_RS25300 (M2894_25300) | 41701..42003 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| M2894_RS25305 (M2894_25305) | 42000..42626 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| M2894_RS25310 (M2894_25310) | 42822..44093 | - | 1272 | WP_248910725.1 | Y-family DNA polymerase | - |
| M2894_RS25315 (M2894_25315) | 44093..44530 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M2894_RS25320 (M2894_25320) | 44527..44775 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| M2894_RS25325 (M2894_25325) | 45193..46095 | + | 903 | WP_170891839.1 | DUF1281 domain-containing protein | - |
| M2894_RS25330 (M2894_25330) | 46092..46403 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| M2894_RS25335 (M2894_25335) | 46480..47163 | + | 684 | WP_248910726.1 | DNA methylase | - |
| M2894_RS25340 (M2894_25340) | 47164..47385 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| M2894_RS25345 (M2894_25345) | 47315..47833 | + | 519 | WP_248910736.1 | DUF1380 family protein | - |
| M2894_RS25350 (M2894_25350) | 47879..48655 | + | 777 | WP_248910728.1 | hypothetical protein | - |
| M2894_RS25355 (M2894_25355) | 49073..49500 | + | 428 | Protein_55 | antirestriction protein | - |
| M2894_RS25360 (M2894_25360) | 49547..49969 | + | 423 | WP_248910730.1 | DUF1380 family protein | - |
| M2894_RS25365 (M2894_25365) | 49966..50157 | + | 192 | WP_248910731.1 | hypothetical protein | - |
| M2894_RS25370 (M2894_25370) | 50231..50578 | + | 348 | WP_248910733.1 | hypothetical protein | - |
| M2894_RS25375 (M2894_25375) | 50931..51459 | + | 529 | Protein_59 | single-stranded DNA-binding protein | - |
| M2894_RS25380 (M2894_25380) | 51517..51752 | + | 236 | Protein_60 | DUF905 family protein | - |
| M2894_RS25385 (M2894_25385) | 51811..53773 | + | 1963 | Protein_61 | ParB/RepB/Spo0J family partition protein | - |
| M2894_RS25390 (M2894_25390) | 53828..54263 | + | 436 | Protein_62 | conjugation system SOS inhibitor PsiB | - |
| M2894_RS25395 (M2894_25395) | 54260..54979 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| M2894_RS25400 (M2894_25400) | 54976..55572 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| M2894_RS25405 (M2894_25405) | 56034..56534 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| M2894_RS25410 (M2894_25410) | 57266..57700 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| M2894_RS25415 (M2894_25415) | 57793..58059 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| M2894_RS25420 (M2894_25420) | 58236..58625 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| M2894_RS25425 (M2894_25425) | 58622..59512 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| M2894_RS25430 (M2894_25430) | 59512..59781 | + | 270 | WP_032072251.1 | hypothetical protein | VF |
| M2894_RS25435 (M2894_25435) | 59812..60063 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| M2894_RS25440 (M2894_25440) | 60097..60402 | - | 306 | WP_181013949.1 | hypothetical protein | - |
| M2894_RS25445 (M2894_25445) | 60642..61490 | + | 849 | WP_001077044.1 | DUF4942 domain-containing protein | - |
| M2894_RS25450 (M2894_25450) | 61576..61911 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M2894_RS25455 (M2894_25455) | 62144..62476 | + | 333 | WP_001291057.1 | plasmid mobilization protein MobA | - |
| M2894_RS25460 (M2894_25460) | 62488..65208 | + | 2721 | WP_170891853.1 | Protein TraI | Relaxase |
| M2894_RS25465 (M2894_25465) | 65429..67729 | - | 2301 | WP_159379017.1 | F-type conjugative transfer protein TrbC | - |
| M2894_RS25470 (M2894_25470) | 67710..68834 | - | 1125 | WP_000152378.1 | DsbC family protein | - |
| M2894_RS25475 (M2894_25475) | 68831..70156 | - | 1326 | WP_170905792.1 | IncI1-type conjugal transfer protein TrbA | - |
| M2894_RS25480 (M2894_25480) | 70494..70640 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| M2894_RS26520 | 70693..70788 | + | 96 | WP_001388983.1 | DinQ-like type I toxin DqlB | - |
| M2894_RS26525 | 71377..71472 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| M2894_RS25490 (M2894_25490) | 71535..71711 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| M2894_RS25495 (M2894_25495) | 71862..72329 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| M2894_RS25500 (M2894_25500) | 72489..73112 | + | 624 | WP_001155251.1 | helix-turn-helix domain-containing protein | - |
| M2894_RS25505 (M2894_25505) | 73310..73525 | - | 216 | WP_000266544.1 | hypothetical protein | - |
| M2894_RS25510 (M2894_25510) | 73529..73897 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| M2894_RS25515 (M2894_25515) | 74197..74439 | - | 243 | WP_170888022.1 | hypothetical protein | - |
| M2894_RS25520 (M2894_25520) | 74989..75642 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M2894_RS25525 (M2894_25525) | 75730..77895 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| M2894_RS25530 (M2894_25530) | 77970..78539 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| M2894_RS25535 (M2894_25535) | 78536..79741 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| M2894_RS25540 (M2894_25540) | 79699..80319 | - | 621 | WP_000286854.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|