MGE detailed information
MGE type: Mobilizable plasmid MGE length: 59528 bp
Accession: NZ_CP095792 Location: 1..59528 Organism: Escherichia fergusonii strain EF21JD053 Replicon: plasmid pJD053-MCR-59K
Accession: NZ_CP095792 Location: 1..59528 Organism: Escherichia fergusonii strain EF21JD053 Replicon: plasmid pJD053-MCR-59K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYB88_RS25125 (MYB88_25120) | 1..1029 | + | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| MYB88_RS25130 (MYB88_25125) | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| MYB88_RS25135 (MYB88_25130) | 2570..2722 | + | 153 | Protein_2 | DUF5431 family protein | - |
| MYB88_RS25140 (MYB88_25135) | 2667..2789 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| MYB88_RS25145 (MYB88_25140) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| MYB88_RS25150 (MYB88_25145) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| MYB88_RS25155 (MYB88_25150) | 3911..4576 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| MYB88_RS25160 (MYB88_25155) | 5274..6473 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| MYB88_RS25165 (MYB88_25160) | 6483..6671 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| MYB88_RS25170 (MYB88_25165) | 6878..7156 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| MYB88_RS25175 (MYB88_25170) | 7576..7842 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| MYB88_RS25180 (MYB88_25175) | 7949..8392 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| MYB88_RS25185 (MYB88_25180) | 8689..8871 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| MYB88_RS25190 (MYB88_25185) | 8896..9333 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| MYB88_RS25195 (MYB88_25190) | 9464..9790 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| MYB88_RS25200 (MYB88_25195) | 9810..10517 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| MYB88_RS25205 (MYB88_25200) | 10519..11271 | - | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| MYB88_RS25210 (MYB88_25205) | 11289..11690 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| MYB88_RS25215 (MYB88_25210) | 12058..12399 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| MYB88_RS25220 (MYB88_25215) | 12396..16709 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| MYB88_RS25225 (MYB88_25220) | 16930..18555 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| MYB88_RS25230 (MYB88_25225) | 18627..19400 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| MYB88_RS25235 (MYB88_25230) | 19359..19799 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| MYB88_RS25240 (MYB88_25235) | 20145..20351 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| MYB88_RS25245 (MYB88_25240) | 20420..22585 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| MYB88_RS25250 (MYB88_25245) | 22590..23165 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| MYB88_RS25255 (MYB88_25250) | 23335..25011 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| MYB88_RS25260 (MYB88_25255) | 25106..25638 | - | 533 | Protein_27 | thermonuclease family protein | - |
| MYB88_RS25265 (MYB88_25260) | 25668..26321 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| MYB88_RS25270 (MYB88_25265) | 26333..27457 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| MYB88_RS25275 (MYB88_25270) | 27553..27750 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| MYB88_RS25280 (MYB88_25275) | 28816..30192 | - | 1377 | WP_000750519.1 | hypothetical protein | VF |
| MYB88_RS25285 (MYB88_25280) | 30205..30840 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| MYB88_RS25290 (MYB88_25285) | 30844..31326 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| MYB88_RS25295 (MYB88_25290) | 31392..31949 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| MYB88_RS25300 (MYB88_25295) | 31994..33103 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MYB88_RS25305 (MYB88_25300) | 33094..34632 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| MYB88_RS25310 (MYB88_25305) | 34657..35151 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| MYB88_RS25315 (MYB88_25310) | 35135..36445 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| MYB88_RS25320 (MYB88_25315) | 36496..38139 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| MYB88_RS25325 (MYB88_25320) | 38132..38668 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| MYB88_RS25330 (MYB88_25325) | 38715..40673 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MYB88_RS25335 (MYB88_25330) | 40689..41744 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| MYB88_RS25340 (MYB88_25335) | 41763..42902 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| MYB88_RS25345 (MYB88_25340) | 42892..43662 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| MYB88_RS25350 (MYB88_25345) | 43659..44393 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| MYB88_RS25355 (MYB88_25350) | 44559..46916 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| MYB88_RS25360 (MYB88_25355) | 46922..47242 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| MYB88_RS25365 (MYB88_25360) | 47313..47603 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| MYB88_RS25370 (MYB88_25365) | 47603..48187 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| MYB88_RS25375 (MYB88_25370) | 48208..48606 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| MYB88_RS25380 (MYB88_25375) | 48725..49162 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| MYB88_RS25385 (MYB88_25380) | 49168..50403 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| MYB88_RS25390 (MYB88_25385) | 50406..50705 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| MYB88_RS25395 (MYB88_25390) | 50773..51054 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MYB88_RS25400 (MYB88_25395) | 51044..51295 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| MYB88_RS25405 (MYB88_25400) | 51395..52030 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| MYB88_RS25410 (MYB88_25405) | 52103..52390 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| MYB88_RS25415 (MYB88_25410) | 52403..52657 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| MYB88_RS25420 (MYB88_25415) | 52659..53300 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| MYB88_RS25425 (MYB88_25420) | 53306..54301 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| MYB88_RS25430 (MYB88_25425) | 54305..54562 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| MYB88_RS25435 (MYB88_25430) | 54559..54861 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| MYB88_RS25440 (MYB88_25435) | 54842..55099 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| MYB88_RS25445 (MYB88_25440) | 55132..55578 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| MYB88_RS25450 (MYB88_25445) | 55589..55759 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| MYB88_RS25455 (MYB88_25450) | 55763..56206 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| MYB88_RS25460 (MYB88_25455) | 56580..57533 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| MYB88_RS25465 (MYB88_25460) | 57560..57736 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| MYB88_RS25470 (MYB88_25465) | 57729..57944 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| MYB88_RS25475 (MYB88_25470) | 57937..58389 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|