MGE detailed information
MGE type: IScluster/Tn MGE length: 20488 bp
Accession: NZ_CP094988 Location: 46114..66601 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Accession: NZ_CP094988 Location: 46114..66601 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS23580 (MT485_23580) | 42185..43165 | + | 981 | WP_000431558.1 | ParB family protein | - |
| MT485_RS23585 (MT485_23585) | 43421..43906 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| MT485_RS23590 (MT485_23590) | 43933..44112 | - | 180 | Protein_59 | transposase domain-containing protein | - |
| MT485_RS23595 (MT485_23595) | 44195..45322 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| MT485_RS23600 (MT485_23600) | 45244..45582 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| MT485_RS23605 (MT485_23605) | 45898..46077 | - | 180 | Protein_62 | transposase | - |
| MT485_RS23610 (MT485_23610) | 46114..47323 | - | 1210 | Protein_63 | IS3 family transposase | - |
| MT485_RS23615 (MT485_23615) | 47380..47676 | - | 297 | Protein_64 | DDE-type integrase/transposase/recombinase | - |
| MT485_RS23620 (MT485_23620) | 47792..47980 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| MT485_RS23625 (MT485_23625) | 47990..49188 | + | 1199 | WP_094081567.1 | IS91 family transposase | - |
| MT485_RS23630 (MT485_23630) | 49361..50115 | - | 755 | Protein_67 | IS3 family transposase IS150 | Transposase |
| MT485_RS23635 (MT485_23635) | 50126..50485 | + | 360 | Protein_68 | IS21 family transposase IS100 | Transposase |
| MT485_RS23640 (MT485_23640) | 50478..51266 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| MT485_RS23645 (MT485_23645) | 51695..52096 | + | 402 | Protein_70 | integrase core domain-containing protein | - |
| MT485_RS23650 (MT485_23650) | 52278..52544 | + | 267 | WP_000957716.1 | hypothetical protein | VF |
| MT485_RS23655 (MT485_23655) | 52734..53431 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS23660 (MT485_23660) | 53692..54888 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| MT485_RS23665 (MT485_23665) | 55224..56915 | + | 1692 | WP_128570052.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| MT485_RS23670 (MT485_23670) | 56967..58175 | + | 1209 | Protein_75 | IS3 family transposase | - |
| MT485_RS23675 (MT485_23675) | 58218..58741 | - | 524 | Protein_76 | IS3 family transposase ISSfl11 | Transposase |
| MT485_RS23680 (MT485_23680) | 58809..59291 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| MT485_RS23685 (MT485_23685) | 59282..59584 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| MT485_RS23690 (MT485_23690) | 59856..60128 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| MT485_RS23695 (MT485_23695) | 60109..61316 | + | 1208 | WP_094085525.1 | IS91 family transposase ISSbo1 | Transposase |
| MT485_RS23700 (MT485_23700) | 61488..61616 | + | 129 | Protein_81 | IS5 family transposase ISSfl7 | Transposase |
| MT485_RS23705 (MT485_23705) | 61765..63219 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| MT485_RS23710 (MT485_23710) | 63623..64242 | + | 620 | Protein_83 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS23715 (MT485_23715) | 64292..65501 | + | 1210 | Protein_84 | IS3 family transposase | - |
| MT485_RS23720 (MT485_23720) | 65545..65955 | + | 411 | Protein_85 | IS66 family transposase ISEc47 | Transposase |
| MT485_RS23725 (MT485_23725) | 65987..66601 | + | 615 | Protein_86 | IS21 family transposase ISEc10 | Transposase |
| MT485_RS23730 (MT485_23730) | 66770..70864 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| MT485_RS23735 (MT485_23735) | 71266..71454 | + | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|