MGE detailed information
MGE type: IScluster/Tn MGE length: 22105 bp
Accession: NZ_CP094988 Location: 178388..200492 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Accession: NZ_CP094988 Location: 178388..200492 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS24320 (MT485_24320) | 174609..175511 | + | 903 | Protein_206 | DUF1281 domain-containing protein | - |
| MT485_RS24325 (MT485_24325) | 175508..175819 | + | 312 | WP_011114770.1 | hypothetical protein | - |
| MT485_RS24330 (MT485_24330) | 175883..176566 | + | 684 | WP_000086135.1 | DNA methylase | - |
| MT485_RS24335 (MT485_24335) | 176567..176788 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| MT485_RS24340 (MT485_24340) | 176748..177234 | + | 487 | Protein_210 | DUF1380 family protein | - |
| MT485_RS24345 (MT485_24345) | 177279..178049 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| MT485_RS24350 (MT485_24350) | 178388..179107 | - | 720 | Protein_212 | IS110 family transposase ISSfl8 | Transposase |
| MT485_RS24355 (MT485_24355) | 179116..180177 | - | 1062 | Protein_213 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24365 (MT485_24365) | 181433..181984 | - | 552 | Protein_215 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24370 (MT485_24370) | 181981..182331 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24375 (MT485_24375) | 182328..183002 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24380 (MT485_24380) | 183201..183671 | + | 471 | Protein_218 | IS1 family transposase IS1N | Transposase |
| MT485_RS24385 (MT485_24385) | 183830..184468 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| MT485_RS24390 (MT485_24390) | 184583..184852 | + | 270 | Protein_220 | IS3 family transposase ISEc48 | Transposase |
| MT485_RS24395 (MT485_24395) | 184940..185982 | + | 1043 | Protein_221 | IS3 family transposase IS2 | Transposase |
| MT485_RS24400 (MT485_24400) | 186062..186736 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24405 (MT485_24405) | 186733..187083 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24410 (MT485_24410) | 187080..188681 | + | 1602 | WP_005067462.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS24415 (MT485_24415) | 188870..189055 | + | 186 | Protein_225 | IS21 family transposase IS100 | Transposase |
| MT485_RS24420 (MT485_24420) | 189155..189364 | - | 210 | Protein_226 | peptidoglycan-binding protein | - |
| MT485_RS24425 (MT485_24425) | 189414..189665 | - | 252 | WP_001381727.1 | transporter | - |
| MT485_RS24430 (MT485_24430) | 190117..190401 | + | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| MT485_RS24435 (MT485_24435) | 190401..190676 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MT485_RS24445 (MT485_24445) | 191655..192608 | + | 954 | Protein_231 | IS66 family transposase ISEc49 | Transposase |
| MT485_RS24450 (MT485_24450) | 193144..193362 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MT485_RS24455 (MT485_24455) | 193364..193669 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MT485_RS24460 (MT485_24460) | 194062..195699 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| MT485_RS24465 (MT485_24465) | 195907..196176 | + | 270 | Protein_235 | type II toxin-antitoxin system antitoxin YacA | - |
| MT485_RS24470 (MT485_24470) | 196176..196345 | + | 170 | Protein_236 | type II toxin-antitoxin system toxin YacB | - |
| MT485_RS24475 (MT485_24475) | 196428..197018 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| MT485_RS24480 (MT485_24480) | 197375..197641 | + | 267 | Protein_238 | IS66 family transposase ISCro1 | Transposase |
| MT485_RS24485 (MT485_24485) | 197704..198972 | + | 1269 | Protein_239 | IS4 family transposase IS4 | Transposase |
| MT485_RS24490 (MT485_24490) | 199029..200238 | + | 1210 | Protein_240 | IS3 family transposase | - |
| MT485_RS24495 (MT485_24495) | 200279..200359 | + | 81 | Protein_241 | hypothetical protein | - |
| MT485_RS24500 (MT485_24500) | 200373..200564 | - | 192 | Protein_242 | IS66 family transposase ISCro1 | Transposase |
| MT485_RS24505 (MT485_24505) | 200562..200886 | + | 325 | Protein_243 | IS3 family transposase | - |
| MT485_RS24510 (MT485_24510) | 200916..203828 | - | 2913 | WP_011114777.1 | ankyrin repeat domain-containing protein | - |
| MT485_RS24515 (MT485_24515) | 204311..205153 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|