MGE detailed information
MGE type: Prophage MGE length: 74620 bp
Accession: NZ_CP093369 Location: 3552505..3627124 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Accession: NZ_CP093369 Location: 3552505..3627124 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Q35_RS17180 (3548141) | 3548141..3549802 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| L0Q35_RS17185 (3549951) | 3549951..3550292 | + | 342 | Protein_3377 | outer membrane protein assembly factor BamE | - |
| L0Q35_RS17190 (3550354) | 3550354..3550644 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| L0Q35_RS17195 (3550634) | 3550634..3551071 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| L0Q35_RS17200 (3551242) | 3551242..3551724 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| L0Q35_RS17210 (3552505) | 3552505..3553746 | + | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| L0Q35_RS17215 (3553990) | 3553990..3554946 | - | 957 | WP_000510827.1 | protein YfjH | - |
| L0Q35_RS17220 (3554990) | 3554990..3555202 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| L0Q35_RS17225 (3555331) | 3555331..3556740 | + | 1410 | WP_000481742.1 | YfjI family protein | - |
| L0Q35_RS17230 (3556893) | 3556893..3557519 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| L0Q35_RS17235 (3557697) | 3557697..3559886 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| L0Q35_RS17240 (3559883) | 3559883..3561499 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| L0Q35_RS17245 (3561859) | 3561859..3562122 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| L0Q35_RS17250 (3562264) | 3562264..3563337 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| L0Q35_RS17255 (3563330) | 3563330..3563701 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| L0Q35_RS17260 (3564056) | 3564056..3564919 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| L0Q35_RS17265 (3565011) | 3565011..3565832 | + | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| L0Q35_RS17270 (3566049) | 3566049..3566750 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| L0Q35_RS17275 (3566791) | 3566791..3567027 | + | 237 | WP_001144029.1 | protein YpjK | - |
| L0Q35_RS17280 (3567027) | 3567027..3567470 | + | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| L0Q35_RS17285 (3567494) | 3567494..3567961 | + | 468 | WP_000702495.1 | protein YfjT | - |
| L0Q35_RS17290 (3568348) | 3568348..3568500 | - | 153 | Protein_3397 | arsenate reductase | - |
| L0Q35_RS17295 (3568513) | 3568513..3569522 | - | 1010 | Protein_3398 | arsenic transporter | - |
| L0Q35_RS17300 (3569664) | 3569664..3571367 | + | 1704 | WP_000896263.1 | protein YfjW | - |
| L0Q35_RS17305 (3571978) | 3571978..3572162 | + | 185 | Protein_3400 | DUF905 family protein | - |
| L0Q35_RS17310 (3572265) | 3572265..3572723 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| L0Q35_RS17315 (3572732) | 3572732..3573214 | + | 483 | WP_240275544.1 | RadC family protein | - |
| L0Q35_RS17320 (3573223) | 3573223..3573423 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| L0Q35_RS17325 (3573461) | 3573461..3573778 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| L0Q35_RS17330 (3573799) | 3573799..3574128 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| L0Q35_RS17335 (3574492) | 3574492..3579072 | - | 4581 | WP_010723187.1 | hypothetical protein | VF |
| L0Q35_RS17340 (3579137) | 3579137..3579256 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| L0Q35_RS22765 (3579411) | 3579411..3579590 | - | 180 | WP_087676347.1 | DNA invertase | - |
| L0Q35_RS17350 (3579984) | 3579984..3581357 | - | 1374 | Protein_3409 | DUF5507 domain-containing protein | - |
| L0Q35_RS17360 (3582743) | 3582743..3584995 | + | 2253 | Protein_3410 | alpha-amylase family glycosyl hydrolase | - |
| L0Q35_RS17365 (3585331) | 3585331..3586308 | + | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| L0Q35_RS17370 (3586328) | 3586328..3587596 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| L0Q35_RS17375 (3587619) | 3587619..3589067 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| L0Q35_RS17380 (3589081) | 3589081..3590361 | + | 1281 | WP_001087611.1 | hypothetical protein | VF |
| L0Q35_RS17385 (3590599) | 3590599..3591999 | + | 1401 | WP_001295173.1 | GABA permease | - |
| L0Q35_RS17390 (3592020) | 3592020..3592682 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| L0Q35_RS17395 (3592683) | 3592683..3593132 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| L0Q35_RS17400 (3593216) | 3593216..3593374 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| L0Q35_RS17405 (3593557) | 3593557..3593856 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| L0Q35_RS17410 (3593866) | 3593866..3594390 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| L0Q35_RS17415 (3594437) | 3594437..3594841 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| L0Q35_RS17420 (3595510) | 3595510..3595959 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| L0Q35_RS17425 (3595996) | 3595996..3596340 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| L0Q35_RS17430 (3596492) | 3596492..3596821 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| L0Q35_RS17435 (3597069) | 3597069..3597314 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| L0Q35_RS17440 (3597311) | 3597311..3597721 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| L0Q35_RS17445 (3597694) | 3597694..3599838 | + | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| L0Q35_RS17450 (3599848) | 3599848..3600807 | + | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| L0Q35_RS17455 (3601161) | 3601161..3602363 | + | 1203 | WP_000985494.1 | hypothetical protein | VF |
| L0Q35_RS17460 (3602356) | 3602356..3603420 | + | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| L0Q35_RS17465 (3603478) | 3603478..3604470 | + | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| L0Q35_RS17470 (3604662) | 3604662..3605839 | + | 1178 | Protein_3432 | MFS transporter | - |
| L0Q35_RS17475 (3605963) | 3605963..3606700 | + | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| L0Q35_RS17480 (3606690) | 3606690..3607025 | + | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| L0Q35_RS17485 (3607116) | 3607116..3607646 | + | 531 | WP_000378442.1 | hypothetical protein | VF |
| L0Q35_RS17490 (3607773) | 3607773..3608945 | + | 1173 | WP_001326681.1 | hypothetical protein | VF |
| L0Q35_RS17495 (3608962) | 3608962..3610500 | + | 1539 | WP_001295176.1 | hypothetical protein | VF |
| L0Q35_RS17500 (3610564) | 3610564..3611079 | - | 516 | WP_001130211.1 | hypothetical protein | VF |
| L0Q35_RS17505 (3611229) | 3611229..3612785 | - | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| L0Q35_RS17510 (3612858) | 3612858..3613286 | - | 429 | WP_001287454.1 | YqaA family protein | - |
| L0Q35_RS17515 (3613283) | 3613283..3613849 | - | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| L0Q35_RS17545 (3615307) | 3615307..3615492 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| L0Q35_RS17550 (3615727) | 3615727..3618357 | - | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| L0Q35_RS17555 (3618485) | 3618485..3618985 | - | 501 | WP_000140508.1 | recombination regulator RecX | - |
| L0Q35_RS17560 (3619054) | 3619054..3620115 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| L0Q35_RS17565 (3620195) | 3620195..3620692 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| L0Q35_RS17570 (3620837) | 3620837..3621922 | - | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| L0Q35_RS17575 (3622178) | 3622178..3622741 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| L0Q35_RS17580 (3622738) | 3622738..3623697 | + | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| L0Q35_RS17585 (3623708) | 3623708..3624079 | + | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| L0Q35_RS17590 (3624083) | 3624083..3624862 | + | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| L0Q35_RS17595 (3624967) | 3624967..3625326 | + | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| L0Q35_RS17600 (3625393) | 3625393..3626166 | + | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| L0Q35_RS17605 (3626159) | 3626159..3627124 | + | 966 | WP_001287420.1 | hypothetical protein | VF |
| L0Q35_RS17610 (3627121) | 3627121..3628635 | - | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| L0Q35_RS17615 (3628822) | 3628822..3630261 | + | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| L0Q35_RS17620 (3630258) | 3630258..3631391 | + | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|