MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP093011 Location: 1280634..1329599 Organism: Escherichia coli strain 131 Replicon: chromosome
Accession: NZ_CP093011 Location: 1280634..1329599 Organism: Escherichia coli strain 131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF86_RS06350 (1276835) | 1276835..1277422 | + | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
| LJF86_RS06355 (1277436) | 1277436..1278908 | + | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| LJF86_RS06360 (1278922) | 1278922..1280592 | + | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| LJF86_RS06365 (1281674) | 1281674..1282237 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| LJF86_RS06370 (1282567) | 1282567..1283361 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| LJF86_RS06375 (1283515) | 1283515..1284276 | + | 762 | WP_001524129.1 | protein HyxA | - |
| LJF86_RS25705 (1284318) | 1284318..1286609 | + | 2292 | WP_000798071.1 | outer membrane autotransporter HyxB | - |
| LJF86_RS06390 (1286793) | 1286793..1287461 | + | 669 | WP_001545820.1 | protein YkgH | - |
| LJF86_RS06395 (1287704) | 1287704..1288399 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| LJF86_RS06400 (1288392) | 1288392..1289819 | - | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LJF86_RS06405 (1289830) | 1289830..1290549 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| LJF86_RS06410 (1291075) | 1291075..1291929 | - | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LJF86_RS06415 (1292156) | 1292156..1293481 | + | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LJF86_RS06420 (1293590) | 1293590..1293826 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LJF86_RS06425 (1293838) | 1293838..1294431 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| LJF86_RS06430 (1294591) | 1294591..1295460 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| LJF86_RS06435 (1295708) | 1295708..1296565 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| LJF86_RS06440 (1296690) | 1296690..1300937 | - | 4248 | WP_000092553.1 | Invasin | VF |
| LJF86_RS06445 (1301503) | 1301503..1302354 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| LJF86_RS06450 (1302381) | 1302381..1303370 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| LJF86_RS06455 (1303401) | 1303401..1304294 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| LJF86_RS06460 (1304494) | 1304494..1305420 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| LJF86_RS06465 (1305577) | 1305577..1306497 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| LJF86_RS06470 (1306670) | 1306670..1307812 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| LJF86_RS06475 (1308285) | 1308285..1308386 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| LJF86_RS06480 (1308751) | 1308751..1309014 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LJF86_RS06485 (1309014) | 1309014..1309154 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LJF86_RS06490 (1309189) | 1309189..1309414 | - | 226 | Protein_1269 | protein YkgL | - |
| LJF86_RS06495 (1310238) | 1310238..1310780 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| LJF86_RS06500 (1310855) | 1310855..1311442 | + | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| LJF86_RS06505 (1311499) | 1311499..1312167 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| LJF86_RS06510 (1312193) | 1312193..1314718 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| LJF86_RS06515 (1314708) | 1314708..1316351 | + | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| LJF86_RS06520 (1316320) | 1316320..1317030 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| LJF86_RS06525 (1317337) | 1317337..1317666 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| LJF86_RS06530 (1317678) | 1317678..1317844 | - | 167 | Protein_1277 | tail fiber assembly protein | - |
| LJF86_RS06535 (1317915) | 1317915..1318529 | - | 615 | WP_001019923.1 | YagU family protein | - |
| LJF86_RS06540 (1318744) | 1318744..1318929 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| LJF86_RS06545 (1318978) | 1318978..1319136 | + | 159 | Protein_1280 | integrase | - |
| LJF86_RS06550 (1319363) | 1319363..1319698 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| LJF86_RS06555 (1319906) | 1319906..1320682 | + | 777 | WP_000171155.1 | Prophage integrase IntA ; Integrase | Integrase |
| LJF86_RS06560 (1320847) | 1320847..1321767 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LJF86_RS06565 (1321754) | 1321754..1322536 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LJF86_RS06570 (1322820) | 1322820..1325918 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| LJF86_RS06575 (1325912) | 1325912..1327549 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| LJF86_RS06580 (1327539) | 1327539..1328786 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| LJF86_RS06585 (1328993) | 1328993..1329151 | + | 159 | WP_071550417.1 | ash family protein | - |
| LJF86_RS06590 (1329129) | 1329129..1329599 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| LJF86_RS06595 (1329745) | 1329745..1329948 | + | 204 | Protein_1290 | integrase | - |
| LJF86_RS06605 (1330153) | 1330153..1331406 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LJF86_RS06610 (1331418) | 1331418..1332521 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LJF86_RS06615 (1332810) | 1332810..1333865 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| LJF86_RS06620 (1333904) | 1333904..1334305 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|