MGE detailed information
MGE type: Genomic_island MGE length: 16025 bp
Accession: NZ_CP092533 Location: 4094916..4110940 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Accession: NZ_CP092533 Location: 4094916..4110940 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKD47_RS19910 (4090336) | 4090336..4091358 | - | 1023 | WP_000106007.1 | zinc-binding alcohol dehydrogenase family protein | - |
| MKD47_RS19915 (4091497) | 4091497..4092402 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| MKD47_RS19920 (4092573) | 4092573..4094225 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| MKD47_RS19925 (4094916) | 4094916..4095887 | + | 972 | WP_001774149.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| MKD47_RS19930 (4095951) | 4095951..4096424 | + | 474 | WP_001235681.1 | TRAP transporter small permease | - |
| MKD47_RS19935 (4096421) | 4096421..4097692 | + | 1272 | WP_000118640.1 | TRAP transporter large permease | - |
| MKD47_RS19940 (4097735) | 4097735..4099399 | - | 1665 | WP_001774148.1 | hypothetical protein | VF |
| MKD47_RS19945 (4099776) | 4099776..4101926 | + | 2151 | WP_001314407.1 | pyruvate/proton symporter BtsT | - |
| MKD47_RS19950 (4102044) | 4102044..4102247 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| MKD47_RS19955 (4102258) | 4102258..4103214 | + | 957 | WP_001297640.1 | GTPase | - |
| MKD47_RS19960 (4103300) | 4103300..4103491 | - | 192 | WP_001513538.1 | hypothetical protein | - |
| MKD47_RS19965 (4103532) | 4103532..4104500 | - | 969 | WP_001513537.1 | hypothetical protein | - |
| MKD47_RS19970 (4104641) | 4104641..4107073 | + | 2433 | WP_001513536.1 | DEAD/DEAH box helicase family protein | - |
| MKD47_RS19975 (4107140) | 4107140..4108609 | + | 1470 | WP_001387312.1 | type I restriction-modification system subunit M | - |
| MKD47_RS19980 (4108609) | 4108609..4110378 | + | 1770 | WP_001513535.1 | restriction endonuclease subunit S | - |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4110528) | 4110528..4110604 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| MKD47_RS19985 (4110599) | 4110599..4110940 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| MKD47_RS19990 (4110987) | 4110987..4112150 | - | 1164 | WP_224153787.1 | DUF1524 domain-containing protein | - |
| MKD47_RS19995 (4112204) | 4112204..4113080 | - | 877 | Protein_3912 | DUF262 domain-containing protein | - |
| MKD47_RS20000 (4113486) | 4113486..4114406 | - | 921 | WP_001513532.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| MKD47_RS20005 (4114591) | 4114591..4115871 | + | 1281 | WP_001338077.1 | DUF445 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|