MGE detailed information
MGE type: Prophage MGE length: 65941 bp
Accession: NZ_CP091619 Location: 1946114..2012054 Organism: Salmonella enterica strain 1473 Replicon: chromosome
Accession: NZ_CP091619 Location: 1946114..2012054 Organism: Salmonella enterica strain 1473 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5510_RS09220 () | 1941851..1942303 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| L5510_RS09225 () | 1942333..1943073 | + | 741 | WP_061380270.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| L5510_RS09230 () | 1943110..1943631 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| L5510_RS09235 () | 1943633..1944232 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| L5510_RS09240 () | 1944442..1945134 | + | 693 | WP_058820964.1 | hypothetical protein | - |
| L5510_RS09245 () | 1945494..1946105 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| L5510_RS09250 () | 1946114..1947124 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| L5510_RS09255 () | 1947203..1947988 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| L5510_RS09260 () | 1947985..1948740 | - | 756 | WP_133322679.1 | hypothetical protein | VF |
| L5510_RS09265 () | 1948819..1949763 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| L5510_RS09270 () | 1949779..1951098 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| L5510_RS09275 () | 1951215..1952186 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| L5510_RS09280 () | 1952259..1953701 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| L5510_RS09285 () | 1953825..1954694 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| L5510_RS09290 () | 1955036..1956511 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| L5510_RS09295 () | 1956746..1958557 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| L5510_RS09300 () | 1958595..1959236 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| L5510_RS09305 () | 1959336..1960514 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| L5510_RS09310 () | 1960645..1960935 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| L5510_RS09315 () | 1961003..1961356 | + | 354 | WP_001042119.1 | protein YebF | - |
| L5510_RS09320 () | 1961450..1962109 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| L5510_RS09325 () | 1962322..1964373 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| L5510_RS09330 () | 1964410..1965108 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| L5510_RS09335 () | 1965132..1965788 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| L5510_RS09340 () | 1965896..1966126 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| L5510_RS09345 () | 1966264..1966638 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| L5510_RS09350 () | 1966639..1967514 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| L5510_RS09355 () | 1967531..1967884 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 1967986..1968129 | - | 144 | - | - | Antitoxin Detail |
| - | 1968024..1968127 | + | 104 | - | - | Toxin Detail |
| L5510_RS09360 () | 1968258..1968908 | - | 651 | Protein_1827 | hypothetical protein ; Integrase | Integrase |
| L5510_RS09365 () | 1968919..1969224 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| L5510_RS09370 () | 1969181..1969384 | + | 204 | Protein_1829 | phage tail protein | - |
| L5510_RS09375 () | 1969556..1969711 | + | 156 | Protein_1830 | phage tail protein | - |
| L5510_RS09380 () | 1969817..1970149 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| L5510_RS09385 () | 1970198..1970307 | + | 110 | Protein_1832 | tail fiber assembly protein | - |
| L5510_RS09390 () | 1970398..1970583 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| L5510_RS09395 () | 1970835..1971023 | - | 189 | Protein_1834 | tail fiber assembly protein | - |
| L5510_RS09400 () | 1971019..1971789 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| L5510_RS09405 () | 1971859..1971957 | + | 99 | Protein_1836 | DUF4113 domain-containing protein | - |
| L5510_RS09410 () | 1972280..1972408 | + | 129 | Protein_1837 | helix-turn-helix domain-containing protein | - |
| L5510_RS09415 () | 1972437..1973237 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| L5510_RS09420 () | 1974177..1974485 | - | 309 | Protein_1839 | hypothetical protein ; Integrase | Integrase |
| L5510_RS09425 () | 1974484..1974848 | - | 365 | Protein_1840 | recombinase RecT | - |
| L5510_RS09430 () | 1974845..1974955 | + | 111 | Protein_1841 | replication protein | - |
| L5510_RS09435 () | 1974970..1975365 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| L5510_RS09440 () | 1975652..1976782 | - | 1131 | WP_126524016.1 | GGDEF domain-containing protein | - |
| L5510_RS09445 () | 1977178..1979157 | + | 1980 | WP_024798201.1 | alkyl sulfatase dimerization domain-containing protein | - |
| L5510_RS09450 () | 1979566..1980180 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| L5510_RS09455 () | 1980190..1980348 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| L5510_RS09460 () | 1980481..1981395 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| L5510_RS09465 () | 1982651..1983064 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| L5510_RS09470 () | 1983188..1984396 | + | 1209 | Protein_1849 | IS256 family transposase ISEc39 | Transposase |
| L5510_RS09475 () | 1984542..1984682 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| L5510_RS09480 () | 1984851..1985117 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| L5510_RS09485 () | 1985487..1985906 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| L5510_RS09490 () | 1986142..1986300 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| L5510_RS09495 () | 1986324..1986572 | + | 249 | Protein_1854 | glycosyltransferase | - |
| L5510_RS09500 () | 1986617..1987144 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| L5510_RS09505 () | 1988122..1988860 | - | 739 | Protein_1856 | hypothetical protein ; Integrase | Integrase |
| L5510_RS09510 () | 1988979..1989992 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| L5510_RS09515 () | 1990689..1990892 | - | 204 | WP_024798203.1 | hypothetical protein | VF |
| L5510_RS09520 () | 1991076..1991321 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| L5510_RS09525 () | 1992950..1993426 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| L5510_RS09530 () | 1993755..1994150 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| L5510_RS09535 () | 1994866..1995588 | + | 723 | WP_126524018.1 | hypothetical protein | VF |
| L5510_RS09540 () | 1995873..1996037 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| L5510_RS09545 () | 1996261..1996911 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| L5510_RS09550 () | 1996930..1997121 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| L5510_RS09555 () | 1997232..1997468 | - | 237 | WP_024131167.1 | YebV family protein | - |
| L5510_RS09560 () | 1997586..1999025 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| L5510_RS09565 () | 1999103..2001736 | - | 2634 | WP_001747692.1 | hypothetical protein | VF |
| L5510_RS09570 () | 2001705..2002988 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| L5510_RS09575 () | 2003117..2003614 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| L5510_RS09580 () | 2003712..2004398 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| L5510_RS09585 () | 2004418..2006466 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| L5510_RS09590 () | 2006660..2007541 | + | 882 | WP_000984498.1 | protease HtpX | - |
| L5510_RS09595 () | 2007589..2008962 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| L5510_RS09600 () | 2009139..2009930 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| L5510_RS09605 () | 2010142..2010381 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| L5510_RS09610 () | 2010539..2010682 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| L5510_RS09615 () | 2010753..2011040 | + | 288 | WP_001000660.1 | YebO family protein | - |
| L5510_RS09620 () | 2011689..2011832 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| L5510_RS09625 () | 2011845..2012054 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| L5510_RS09630 () | 2012274..2014019 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| L5510_RS09635 () | 2014085..2014894 | + | 810 | WP_000010924.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| L5510_RS09640 () | 2014891..2015457 | - | 567 | WP_126524021.1 | manganese efflux pump MntP | - |
| L5510_RS09645 () | 2015867..2016325 | - | 459 | WP_126524022.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|