MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 61761 bp
Accession: NZ_CP091426 Location: 1..61761 Organism: Methylobacter sp. YRD-M1 Replicon: plasmid unnamed2
Accession: NZ_CP091426 Location: 1..61761 Organism: Methylobacter sp. YRD-M1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ558_RS22400 (LZ558_22330) | 229..768 | + | 540 | WP_268121158.1 | hypothetical protein | - |
| LZ558_RS22405 (LZ558_22335) | 956..1603 | + | 648 | WP_268121159.1 | Iron-sulfur cluster carrier protein | VF |
| LZ558_RS22410 (LZ558_22340) | 1596..1892 | + | 297 | WP_268121160.1 | hypothetical protein | - |
| LZ558_RS22415 (LZ558_22345) | 2022..2327 | + | 306 | WP_268121161.1 | hypothetical protein | - |
| LZ558_RS22420 (LZ558_22350) | 2525..3430 | - | 906 | WP_268121162.1 | hypothetical protein | - |
| LZ558_RS22425 (LZ558_22355) | 4577..4876 | + | 300 | WP_268121163.1 | hypothetical protein | - |
| LZ558_RS22430 (LZ558_22360) | 4869..5447 | + | 579 | WP_268121165.1 | hypothetical protein | - |
| LZ558_RS22435 (LZ558_22365) | 5681..5977 | + | 297 | WP_268121166.1 | hypothetical protein | - |
| LZ558_RS22440 (LZ558_22370) | 6060..6356 | + | 297 | WP_268121167.1 | hypothetical protein | - |
| LZ558_RS22445 (LZ558_22375) | 6425..7255 | + | 831 | WP_268121168.1 | hypothetical protein | - |
| LZ558_RS22450 (LZ558_22380) | 7252..7755 | + | 504 | WP_268121169.1 | siphovirus Gp157 family protein | - |
| LZ558_RS22455 (LZ558_22385) | 7836..8084 | + | 249 | WP_268121170.1 | helix-turn-helix transcriptional regulator | - |
| LZ558_RS22460 (LZ558_22390) | 8240..8914 | + | 675 | WP_268121171.1 | replication protein RepA | - |
| LZ558_RS22465 (LZ558_22395) | 9421..10296 | + | 876 | WP_268121172.1 | DNA/RNA non-specific endonuclease | - |
| LZ558_RS22470 (LZ558_22400) | 10301..10522 | + | 222 | WP_268121173.1 | hypothetical protein | - |
| LZ558_RS22475 (LZ558_22405) | 10747..11817 | + | 1071 | WP_268121174.1 | DNA-binding protein | - |
| LZ558_RS22480 (LZ558_22410) | 12227..13192 | + | 966 | WP_268121175.1 | replication initiator protein A | - |
| LZ558_RS22485 (LZ558_22415) | 13326..13541 | + | 216 | WP_268121176.1 | GDCCVxC domain-containing (seleno)protein | - |
| LZ558_RS22490 (LZ558_22420) | 13832..14164 | + | 333 | WP_268121178.1 | hypothetical protein | - |
| LZ558_RS22495 (LZ558_22425) | 14426..14653 | - | 228 | WP_268121179.1 | hypothetical protein | - |
| LZ558_RS22500 (LZ558_22430) | 14655..15080 | - | 426 | WP_268121180.1 | PIN domain-containing protein | - |
| LZ558_RS22505 (LZ558_22435) | 15065..15310 | - | 246 | WP_268121181.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LZ558_RS22510 (LZ558_22440) | 15454..16107 | + | 654 | WP_268121182.1 | hypothetical protein | - |
| LZ558_RS22515 (LZ558_22445) | 16100..17023 | + | 924 | WP_268121183.1 | ATP-binding protein | - |
| LZ558_RS22520 (LZ558_22450) | 17085..18194 | + | 1110 | WP_268121184.1 | metal-dependent hydrolase | - |
| LZ558_RS22525 (LZ558_22455) | 18419..18997 | - | 579 | WP_268121185.1 | hypothetical protein | - |
| LZ558_RS22530 (LZ558_22460) | 19327..21537 | + | 2211 | WP_268121192.1 | ATP-dependent RecD-like DNA helicase | - |
| LZ558_RS22535 (LZ558_22465) | 21748..21921 | - | 174 | WP_268121186.1 | hypothetical protein | - |
| LZ558_RS22540 (LZ558_22470) | 22142..23416 | - | 1275 | WP_268121193.1 | Y-family DNA polymerase | - |
| LZ558_RS22545 (LZ558_22475) | 23416..23799 | - | 384 | WP_268121187.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LZ558_RS22550 (LZ558_22480) | 23972..24607 | + | 636 | WP_268121188.1 | transcriptional repressor LexA | - |
| LZ558_RS22555 (LZ558_22485) | 24633..24782 | + | 150 | WP_268121189.1 | hypothetical protein | - |
| LZ558_RS22560 (LZ558_22490) | 25182..25433 | - | 252 | WP_268121190.1 | hypothetical protein | - |
| LZ558_RS22565 (LZ558_22495) | 25816..28803 | - | 2988 | WP_194972027.1 | Tn3 family transposase TnBth2 | Transposase |
| LZ558_RS22570 (LZ558_22500) | 28966..29574 | + | 609 | WP_194972029.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LZ558_RS22575 (LZ558_22505) | 30063..33182 | - | 3120 | WP_194972026.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LZ558_RS22580 (LZ558_22510) | 33184..34689 | - | 1506 | WP_194972025.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LZ558_RS22585 (LZ558_22515) | 34686..35987 | - | 1302 | WP_194972024.1 | TolC family protein | - |
| LZ558_RS22590 (LZ558_22520) | 36083..36514 | - | 432 | WP_194972023.1 | hypothetical protein | - |
| LZ558_RS22595 (LZ558_22525) | 36644..36982 | - | 339 | WP_194972022.1 | hypothetical protein | - |
| LZ558_RS22600 (LZ558_22530) | 37211..37426 | - | 216 | WP_194972021.1 | GDCCVxC domain-containing (seleno)protein | - |
| LZ558_RS22605 (LZ558_22535) | 37423..37713 | - | 291 | WP_268121087.1 | mercury resistance system periplasmic binding protein MerP | - |
| LZ558_RS22610 (LZ558_22540) | 37724..38062 | - | 339 | WP_268121086.1 | mercuric transporter MerT family protein | - |
| LZ558_RS22615 (LZ558_22545) | 38129..38536 | + | 408 | WP_268121085.1 | Hg(II)-responsive transcriptional regulator | - |
| LZ558_RS22620 (LZ558_22550) | 38765..38920 | + | 156 | WP_268121138.1 | hypothetical protein | - |
| LZ558_RS22625 (LZ558_22555) | 39636..40685 | - | 1050 | WP_268121139.1 | DUF4917 family protein | - |
| LZ558_RS22630 (LZ558_22560) | 41234..44266 | - | 3033 | WP_268121140.1 | type I restriction endonuclease subunit R | - |
| LZ558_RS22635 (LZ558_22565) | 44276..45631 | - | 1356 | WP_268121141.1 | restriction endonuclease subunit S | - |
| LZ558_RS22640 (LZ558_22570) | 45624..46721 | - | 1098 | WP_268121142.1 | PDDEXK nuclease domain-containing protein | - |
| LZ558_RS22645 (LZ558_22575) | 46731..49100 | - | 2370 | WP_268121143.1 | class I SAM-dependent DNA methyltransferase | - |
| LZ558_RS22650 (LZ558_22580) | 49127..49414 | - | 288 | WP_268121144.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ558_RS22655 (LZ558_22585) | 49411..49668 | - | 258 | WP_268121145.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LZ558_RS22660 (LZ558_22590) | 49733..49969 | - | 237 | WP_268121146.1 | WGR domain-containing protein | - |
| LZ558_RS22665 (LZ558_22595) | 50051..51397 | - | 1347 | WP_268121148.1 | hypothetical protein | - |
| LZ558_RS22670 (LZ558_22600) | 51430..52470 | - | 1041 | WP_268121149.1 | IS91 family transposase ISWz1 | Transposase |
| LZ558_RS22675 (LZ558_22605) | 52676..52870 | + | 195 | WP_268121150.1 | hypothetical protein | - |
| LZ558_RS22680 (LZ558_22610) | 52945..53115 | + | 171 | WP_268121151.1 | hypothetical protein | - |
| LZ558_RS22685 (LZ558_22615) | 53203..53481 | + | 279 | WP_268121152.1 | hypothetical protein | - |
| LZ558_RS22690 (LZ558_22620) | 53566..54366 | + | 801 | WP_268121153.1 | retropepsin-like aspartic protease | - |
| LZ558_RS22695 (LZ558_22625) | 54427..55224 | + | 798 | WP_268121154.1 | NERD domain-containing protein | - |
| LZ558_RS22700 (LZ558_22630) | 55313..55762 | + | 450 | WP_268121155.1 | DUF1353 domain-containing protein | - |
| LZ558_RS22705 (LZ558_22635) | 56771..58582 | - | 1812 | WP_268121156.1 | tyrosinase family protein | - |
| LZ558_RS22710 (LZ558_22640) | 58584..58865 | - | 282 | WP_268121157.1 | hypothetical protein | - |
| LZ558_RS22715 (LZ558_22645) | 59841..60041 | - | 201 | WP_268121194.1 | cold-shock protein | - |
| LZ558_RS22720 (LZ558_22650) | 60291..61643 | + | 1353 | WP_268117058.1 | IS1182 family transposase ISThsp16 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|