MGE detailed information
MGE type: IScluster/Tn MGE length: 19446 bp
Accession: NZ_CP090964 Location: 49728..69173 Organism: Edwardsiella piscicida strain CZ12001 Replicon: plasmid unnamed2
Accession: NZ_CP090964 Location: 49728..69173 Organism: Edwardsiella piscicida strain CZ12001 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P06_RS18240 (L1P06_18240) | 45492..46001 | - | 510 | WP_109609955.1 | transcription termination/antitermination NusG family protein | - |
| L1P06_RS18245 (L1P06_18245) | 46295..46657 | + | 363 | WP_236893519.1 | helix-turn-helix transcriptional regulator | - |
| L1P06_RS18250 (L1P06_18250) | 46865..47170 | - | 306 | WP_236893520.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| L1P06_RS18255 (L1P06_18255) | 47954..48889 | + | 936 | WP_236893521.1 | Replication protein | - |
| L1P06_RS18260 (L1P06_18260) | 49728..51479 | - | 1752 | Protein_47 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1P06_RS18265 (L1P06_18265) | 51483..51875 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| L1P06_RS18270 (L1P06_18270) | 52013..52897 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| L1P06_RS18275 (L1P06_18275) | 52929..54128 | - | 1200 | WP_035601451.1 | Tetracycline resistance protein, class C | VF |
| L1P06_RS18280 (L1P06_18280) | 54234..54884 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| L1P06_RS18285 (L1P06_18285) | 54916..55158 | - | 243 | WP_000844627.1 | transposase | - |
| L1P06_RS18290 (L1P06_18290) | 55216..58182 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1P06_RS18295 (L1P06_18295) | 58186..58746 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| L1P06_RS18300 (L1P06_18300) | 59056..59400 | + | 345 | Protein_55 | PAS domain-containing protein | - |
| L1P06_RS18305 (L1P06_18305) | 59462..60166 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1P06_RS18310 (L1P06_18310) | 60501..60893 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| L1P06_RS18315 (L1P06_18315) | 61213..61530 | - | 318 | Protein_58 | bleomycin binding protein | - |
| L1P06_RS18320 (L1P06_18320) | 61585..62289 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1P06_RS18325 (L1P06_18325) | 62314..63153 | + | 840 | WP_236893597.1 | methyl-accepting chemotaxis protein | - |
| L1P06_RS18330 (L1P06_18330) | 63416..63703 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| L1P06_RS18335 (L1P06_18335) | 63703..63942 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| L1P06_RS18340 (L1P06_18340) | 63967..64272 | + | 306 | WP_001326990.1 | protein YdfV | - |
| L1P06_RS18345 (L1P06_18345) | 64475..64807 | + | 333 | WP_176703002.1 | FlxA-like family protein | - |
| L1P06_RS18350 (L1P06_18350) | 65383..68370 | - | 2988 | WP_034164963.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| L1P06_RS18355 (L1P06_18355) | 68538..69173 | + | 636 | WP_000470624.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L1P06_RS18360 (L1P06_18360) | 69201..70037 | - | 837 | WP_009652884.1 | S-formylglutathione hydrolase | - |
| L1P06_RS18365 (L1P06_18365) | 70103..70501 | - | 399 | WP_000235177.1 | VOC family protein | - |
| L1P06_RS18370 (L1P06_18370) | 70543..71652 | - | 1110 | WP_000842086.1 | S-(hydroxymethyl)glutathione dehydrogenase | - |
| L1P06_RS18375 (L1P06_18375) | 71683..71958 | - | 276 | WP_001141270.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| L1P06_RS18380 (L1P06_18380) | 72351..73172 | - | 822 | WP_236893523.1 | hypothetical protein | - |
| L1P06_RS18385 (L1P06_18385) | 73169..73874 | - | 706 | Protein_72 | DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|