MGE detailed information
MGE type: Genomic_island MGE length: 45474 bp
Accession: NZ_CP090884 Location: 965041..1010514 Organism: Streptococcus pneumoniae strain MD5403 Replicon: chromosome
Accession: NZ_CP090884 Location: 965041..1010514 Organism: Streptococcus pneumoniae strain MD5403 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1A15_RS04965 (L1A15_04965) | 960936..961550 | + | 615 | WP_000476372.1 | cell wall hydrolase Pmp23 | - |
| L1A15_RS04970 (L1A15_04970) | 961624..962598 | + | 975 | WP_001227738.1 | DUF1002 domain-containing protein | - |
| L1A15_RS04975 (L1A15_04975) | 962672..964303 | + | 1632 | WP_000914588.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| L1A15_RS04980 (L1A15_04980) | 964517..964795 | + | 279 | WP_000710807.1 | hypothetical protein | - |
| L1A15_RS04985 (L1A15_04985) | 965041..965259 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| L1A15_RS04990 (L1A15_04990) | 965652..966677 | + | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| L1A15_RS04995 (L1A15_04995) | 966667..967674 | + | 1008 | WP_001244693.1 | iron ABC transporter permease | - |
| L1A15_RS05000 (L1A15_05000) | 967674..968681 | + | 1008 | WP_001180357.1 | iron ABC transporter permease | - |
| L1A15_RS05005 (L1A15_05005) | 968681..969475 | + | 795 | WP_000677518.1 | ABC transporter ATP-binding protein | - |
| L1A15_RS05010 (L1A15_05010) | 969626..969810 | + | 185 | Protein_982 | IS3 family transposase | - |
| L1A15_RS05015 (L1A15_05015) | 969929..970252 | + | 324 | WP_229294054.1 | restriction endonuclease subunit S | - |
| L1A15_RS05020 (L1A15_05020) | 970233..970532 | + | 300 | Protein_984 | hypothetical protein | - |
| L1A15_RS05025 (L1A15_05025) | 971217..971378 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| L1A15_RS05030 (L1A15_05030) | 971470..973148 | + | 1679 | Protein_986 | recombinase family protein | - |
| L1A15_RS05035 (L1A15_05035) | 973416..973982 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| L1A15_RS05040 (L1A15_05040) | 974304..974492 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| L1A15_RS05045 (L1A15_05045) | 974554..975312 | + | 759 | WP_000262016.1 | ATP-grasp domain-containing protein | - |
| L1A15_RS05050 (L1A15_05050) | 975370..976224 | + | 855 | WP_000900019.1 | ADP-ribosylglycohydrolase family protein | - |
| L1A15_RS05055 (L1A15_05055) | 976336..977220 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| L1A15_RS05060 (L1A15_05060) | 977383..979122 | + | 1740 | WP_000423464.1 | glycoside hydrolase family 13 protein | - |
| L1A15_RS05065 (L1A15_05065) | 979397..979852 | + | 456 | WP_000500478.1 | hypothetical protein | - |
| L1A15_RS05070 (L1A15_05070) | 980297..980773 | + | 477 | WP_000579602.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| L1A15_RS05075 (L1A15_05075) | 980773..981534 | + | 762 | WP_000405368.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| L1A15_RS05080 (L1A15_05080) | 981562..982719 | + | 1158 | WP_001213951.1 | hypothetical protein | - |
| L1A15_RS05085 (L1A15_05085) | 983551..983910 | + | 360 | WP_000529545.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| L1A15_RS05090 (L1A15_05090) | 983920..984285 | + | 366 | WP_000263039.1 | plasmid mobilization relaxosome protein MobC | - |
| L1A15_RS05095 (L1A15_05095) | 984272..986122 | + | 1851 | Protein_999 | SAG1250 family conjugative relaxase | - |
| L1A15_RS05100 (L1A15_05100) | 986395..987360 | + | 966 | WP_000974692.1 | D-alanine--D-alanine ligase | - |
| L1A15_RS05105 (L1A15_05105) | 987426..988634 | + | 1209 | WP_000691719.1 | enolase | - |
| L1A15_RS05110 (L1A15_05110) | 988627..989520 | + | 894 | WP_000368611.1 | aminotransferase class IV | - |
| L1A15_RS05115 (L1A15_05115) | 989517..990329 | + | 813 | WP_000588707.1 | 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein | - |
| L1A15_RS05120 (L1A15_05120) | 990326..991243 | + | 918 | WP_001232538.1 | serine hydroxymethyltransferase | - |
| L1A15_RS05125 (L1A15_05125) | 991209..992417 | + | 1209 | WP_000282560.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| L1A15_RS05130 (L1A15_05130) | 992407..993201 | + | 795 | WP_000351847.1 | nucleoside-diphosphate kinase | - |
| L1A15_RS05135 (L1A15_05135) | 993204..994388 | + | 1185 | WP_000239146.1 | histone-lysine N-methyltransferase | - |
| L1A15_RS05140 (L1A15_05140) | 994348..995709 | + | 1362 | WP_000932706.1 | hypothetical protein | - |
| L1A15_RS05145 (L1A15_05145) | 995768..996643 | + | 876 | WP_001809188.1 | isocitrate lyase/phosphoenolpyruvate mutase family protein | - |
| L1A15_RS05150 (L1A15_05150) | 996633..997730 | + | 1098 | WP_000836759.1 | thiamine pyrophosphate-dependent enzyme | - |
| L1A15_RS05155 (L1A15_05155) | 997732..998523 | + | 792 | WP_001809189.1 | seryl-tRNA synthetase | - |
| L1A15_RS05160 (L1A15_05160) | 998523..999572 | + | 1050 | WP_001231246.1 | nucleotidyltransferase family protein | - |
| L1A15_RS05165 (L1A15_05165) | 999699..999938 | + | 240 | WP_000872900.1 | phosphopantetheine-binding protein | - |
| L1A15_RS05170 (L1A15_05170) | 1000016..1001545 | + | 1530 | WP_000875205.1 | hypothetical protein | - |
| L1A15_RS05175 (L1A15_05175) | 1001953..1002945 | + | 993 | WP_001240822.1 | ATP-binding cassette domain-containing protein | - |
| L1A15_RS05180 (L1A15_05180) | 1002947..1003765 | + | 819 | WP_000240144.1 | ABC-2 family transporter protein | - |
| L1A15_RS05185 (L1A15_05185) | 1003767..1004551 | + | 785 | Protein_1017 | ABC transporter permease | - |
| L1A15_RS05190 (L1A15_05190) | 1004639..1005650 | + | 1012 | Protein_1018 | family 1 glycosylhydrolase | - |
| L1A15_RS05195 (L1A15_05195) | 1005766..1006644 | + | 879 | Protein_1019 | aldose 1-epimerase family protein | - |
| L1A15_RS05200 (L1A15_05200) | 1006892..1007116 | + | 225 | WP_000284846.1 | helix-turn-helix transcriptional regulator | - |
| L1A15_RS05205 (L1A15_05205) | 1007251..1007412 | + | 162 | WP_001838438.1 | hypothetical protein | - |
| L1A15_RS05210 (L1A15_05210) | 1007521..1009293 | + | 1773 | Protein_1022 | recombinase family protein | - |
| L1A15_RS05215 (L1A15_05215) | 1009377..1009985 | + | 609 | WP_000662936.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| L1A15_RS05220 (L1A15_05220) | 1010092..1010496 | + | 405 | Protein_1024 | phosphotransferase | - |
| L1A15_RS05225 (L1A15_05225) | 1010619..1010929 | + | 311 | Protein_1025 | transposase family protein | - |
| L1A15_RS05230 (L1A15_05230) | 1011073..1012302 | + | 1230 | WP_000703361.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| L1A15_RS05235 (L1A15_05235) | 1012322..1015018 | + | 2697 | WP_000058181.1 | phosphoenolpyruvate carboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|