MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 8453 bp
Accession: NZ_CP090589 Location: 3765001..3773453 Organism: Pectobacterium aroidearum strain QJ316 Replicon: chromosome
Accession: NZ_CP090589 Location: 3765001..3773453 Organism: Pectobacterium aroidearum strain QJ316 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y28_RS16780 (L0Y28_16760) | 3760403..3761854 | + | 1452 | WP_181829819.1 | L-asparagine permease | - |
| L0Y28_RS16785 (L0Y28_16765) | 3761915..3764068 | - | 2154 | WP_256542268.1 | ornithine decarboxylase | - |
| L0Y28_RS16790 | 3764300..3764431 | - | 132 | WP_256542269.1 | hypothetical protein | - |
| L0Y28_RS16800 (L0Y28_16775) | 3765178..3766437 | + | 1260 | WP_256542270.1 | Prophage integrase IntS ; Integrase | Integrase |
| L0Y28_RS16805 (L0Y28_16780) | 3766582..3766752 | - | 171 | WP_164669135.1 | hypothetical protein | - |
| L0Y28_RS16810 (L0Y28_16785) | 3766893..3767234 | + | 342 | WP_256542271.1 | hypothetical protein | - |
| L0Y28_RS16815 (L0Y28_16790) | 3768124..3768867 | + | 744 | WP_198482246.1 | MobC family replication-relaxation protein | - |
| L0Y28_RS16820 (L0Y28_16795) | 3768926..3769144 | + | 219 | WP_198482245.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L0Y28_RS16825 (L0Y28_16800) | 3769147..3769452 | + | 306 | WP_256542272.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| L0Y28_RS16830 (L0Y28_16805) | 3769837..3770880 | - | 1044 | WP_256542273.1 | DUF4435 domain-containing protein | - |
| L0Y28_RS16835 (L0Y28_16810) | 3771081..3772532 | - | 1452 | WP_256542274.1 | hypothetical protein | - |
| L0Y28_RS16840 (L0Y28_16815) | 3773004..3773216 | - | 213 | WP_256542275.1 | hypothetical protein | - |
| L0Y28_RS16845 (L0Y28_16820) | 3773542..3773784 | - | 243 | WP_205947008.1 | helix-turn-helix transcriptional regulator | - |
| L0Y28_RS16850 (L0Y28_16825) | 3773888..3774142 | + | 255 | WP_039285388.1 | helix-turn-helix transcriptional regulator | - |
| L0Y28_RS16855 (L0Y28_16830) | 3774228..3774476 | + | 249 | WP_256542276.1 | helix-turn-helix transcriptional regulator | - |
| L0Y28_RS16860 (L0Y28_16835) | 3774491..3774709 | + | 219 | WP_256542277.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| L0Y28_RS16865 (L0Y28_16840) | 3774757..3775016 | + | 260 | Protein_3296 | type II toxin-antitoxin system toxin CcdB | - |
| L0Y28_RS16870 (L0Y28_16845) | 3775397..3777586 | - | 2190 | WP_256542278.1 | AAA family ATPase | - |
| L0Y28_RS16875 (L0Y28_16850) | 3777744..3778232 | - | 489 | WP_256542279.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|