MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87422 bp
Accession: NZ_CP090563 Location: 1..87422 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: plasmid pCFBP2530-87
Accession: NZ_CP090563 Location: 1..87422 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: plasmid pCFBP2530-87
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM68_RS22900 (LGM68_22910) | 1..627 | + | 627 | WP_005918230.1 | ParA family protein | - |
| LGM68_RS22905 (LGM68_22915) | 624..947 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| LGM68_RS22910 (LGM68_22920) | 1092..1406 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| LGM68_RS22915 (LGM68_22925) | 1654..2901 | + | 1248 | WP_269338333.1 | replication initiation protein | - |
| LGM68_RS22925 (LGM68_22935) | 4492..5717 | + | 1226 | WP_269357797.1 | IS3 family transposase | - |
| LGM68_RS22930 (LGM68_22940) | 5759..6148 | + | 390 | Protein_6 | TAL effector repeat-containing protein | - |
| LGM68_RS22935 (LGM68_22945) | 6419..10423 | + | 4005 | WP_269357799.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS22940 (LGM68_22950) | 10549..10734 | + | 186 | WP_033837725.1 | hypothetical protein | - |
| LGM68_RS22945 (LGM68_22955) | 10888..11517 | + | 630 | WP_269357801.1 | ParA family partition ATPase | - |
| LGM68_RS22950 (LGM68_22960) | 11530..11745 | + | 216 | WP_005918372.1 | plasmid partition protein ParG | - |
| LGM68_RS22955 (LGM68_22965) | 11762..12433 | + | 672 | WP_269357803.1 | hypothetical protein | - |
| LGM68_RS22960 (LGM68_22970) | 12391..12567 | + | 177 | WP_269357805.1 | hypothetical protein | - |
| LGM68_RS22965 (LGM68_22975) | 12583..12789 | + | 207 | WP_078566330.1 | antitoxin VbhA family protein | - |
| LGM68_RS22970 (LGM68_22980) | 12837..13388 | - | 552 | WP_269338338.1 | recombinase family protein | - |
| LGM68_RS22975 (LGM68_22985) | 13608..14063 | + | 456 | WP_229637923.1 | hypothetical protein | - |
| LGM68_RS22980 (LGM68_22990) | 14084..14392 | + | 309 | WP_005918382.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGM68_RS22985 (LGM68_22995) | 14437..14670 | + | 234 | WP_269357807.1 | hypothetical protein | - |
| LGM68_RS22990 (LGM68_23000) | 14872..18672 | + | 3801 | WP_269357809.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS22995 (LGM68_23005) | 18807..19358 | - | 552 | Protein_19 | IS3-like element ISXac2 family transposase | - |
| LGM68_RS23005 (LGM68_23015) | 20662..21483 | - | 822 | WP_269338339.1 | hypothetical protein | - |
| LGM68_RS23010 (LGM68_23020) | 21994..22383 | - | 390 | WP_003490639.1 | hypothetical protein | - |
| LGM68_RS23015 (LGM68_23025) | 22592..23266 | + | 675 | WP_017113468.1 | NYN domain-containing protein | - |
| LGM68_RS23020 (LGM68_23030) | 23319..23858 | - | 540 | WP_078565982.1 | plasmid pRiA4b ORF-3 family protein | - |
| LGM68_RS23025 (LGM68_23035) | 23906..24187 | - | 282 | Protein_25 | hypothetical protein | - |
| LGM68_RS23035 (LGM68_23045) | 25491..27500 | - | 2010 | Protein_27 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS23040 (LGM68_23050) | 28044..28865 | + | 822 | WP_269338341.1 | hypothetical protein | - |
| LGM68_RS23045 (LGM68_23055) | 29595..29945 | - | 351 | WP_269338342.1 | hypothetical protein | - |
| LGM68_RS23050 (LGM68_23060) | 29938..30570 | - | 633 | Protein_30 | ParA family protein | - |
| LGM68_RS23055 (LGM68_23065) | 30797..30952 | - | 156 | Protein_31 | cytosine methyltransferase | - |
| LGM68_RS23060 (LGM68_23070) | 31040..31276 | + | 237 | Protein_32 | KfrA protein | - |
| LGM68_RS23065 | 31395..32024 | + | 630 | Protein_33 | AAA family ATPase | - |
| LGM68_RS23070 (LGM68_23085) | 32021..32257 | + | 237 | WP_078565910.1 | plasmid partition protein ParG | - |
| LGM68_RS23075 (LGM68_23090) | 32664..33017 | - | 354 | WP_269338344.1 | hypothetical protein | - |
| LGM68_RS23080 (LGM68_23095) | 33066..33773 | - | 708 | WP_005931741.1 | StbB family protein | - |
| LGM68_RS23085 (LGM68_23100) | 33770..34216 | - | 447 | WP_033480397.1 | hypothetical protein | - |
| LGM68_RS23090 (LGM68_23105) | 34566..34961 | + | 396 | WP_269338345.1 | conjugal transfer protein TraA | - |
| LGM68_RS23095 (LGM68_23110) | 35057..35326 | + | 270 | WP_003490597.1 | hypothetical protein | - |
| LGM68_RS23100 (LGM68_23115) | 35323..35616 | + | 294 | WP_269338346.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LGM68_RS23110 (LGM68_23125) | 37097..37297 | + | 201 | Protein_42 | transposase | - |
| LGM68_RS23115 (LGM68_23130) | 37359..38293 | + | 935 | Protein_43 | IS3-like element ISXc8 family transposase | - |
| LGM68_RS23125 (LGM68_23140) | 39604..39831 | + | 228 | Protein_45 | IS3 family transposase | - |
| LGM68_RS23130 (LGM68_23145) | 40011..43607 | - | 3597 | WP_089504558.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS23135 (LGM68_23150) | 43824..44444 | + | 621 | WP_269338348.1 | hypothetical protein | - |
| LGM68_RS23140 (LGM68_23155) | 44448..44984 | + | 537 | WP_033482042.1 | hypothetical protein | - |
| LGM68_RS23145 (LGM68_23160) | 45125..46699 | + | 1575 | WP_269357787.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LGM68_RS23150 (LGM68_23165) | 46713..49697 | + | 2985 | WP_269357789.1 | MobF family relaxase | - |
| LGM68_RS23155 (LGM68_23170) | 49987..50271 | + | 285 | WP_003490829.1 | hypothetical protein | - |
| LGM68_RS23160 (LGM68_23175) | 50457..50870 | - | 414 | Protein_52 | hypothetical protein | - |
| LGM68_RS23170 (LGM68_23185) | 52361..52597 | - | 237 | WP_015463816.1 | plasmid partition protein ParG | - |
| LGM68_RS23175 (LGM68_23190) | 52594..53223 | - | 630 | WP_269357791.1 | ParA family partition ATPase | - |
| LGM68_RS23180 (LGM68_23195) | 53343..54035 | - | 693 | WP_269357811.1 | DNA-binding protein | - |
| LGM68_RS23185 (LGM68_23200) | 54074..55161 | + | 1088 | WP_269338307.1 | IS3-like element ISXac2 family transposase | - |
| LGM68_RS23190 (LGM68_23205) | 55558..56613 | - | 1056 | WP_033836455.1 | DNA-binding protein | - |
| LGM68_RS23195 (LGM68_23210) | 56797..58071 | + | 1275 | WP_269338309.1 | site-specific integrase | - |
| LGM68_RS23200 (LGM68_23215) | 58080..61076 | + | 2997 | WP_269355253.1 | Tn3 family transposase | - |
| LGM68_RS23205 (LGM68_23220) | 61124..61471 | - | 348 | Protein_61 | hypothetical protein | - |
| LGM68_RS23210 (LGM68_23225) | 61552..62480 | - | 929 | Protein_62 | IS3-like element ISXac2 family transposase | - |
| LGM68_RS23215 (LGM68_23230) | 62565..63605 | + | 1041 | WP_033474620.1 | IS21 family transposase | - |
| LGM68_RS23220 (LGM68_23235) | 63605..64405 | + | 801 | WP_017154874.1 | IS21-like element helper ATPase IstB | - |
| LGM68_RS23225 (LGM68_23240) | 64436..64615 | - | 180 | Protein_65 | transposase | - |
| LGM68_RS23230 (LGM68_23245) | 65271..66497 | - | 1227 | WP_269338311.1 | replication protein RepA | - |
| LGM68_RS23235 (LGM68_23250) | 66777..67964 | - | 1188 | WP_269357793.1 | zeta toxin family protein | - |
| LGM68_RS23240 (LGM68_23255) | 67971..68234 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| LGM68_RS23245 (LGM68_23260) | 68259..68660 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LGM68_RS23250 (LGM68_23265) | 68657..68917 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LGM68_RS23255 (LGM68_23270) | 69267..72860 | + | 3594 | WP_269338322.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS23260 (LGM68_23275) | 73641..76724 | + | 3084 | WP_269338324.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS23265 (LGM68_23280) | 76835..77224 | + | 390 | Protein_73 | avirulence protein | - |
| LGM68_RS23270 (LGM68_23285) | 77357..78634 | - | 1278 | WP_005918469.1 | lytic murein transglycosylase | - |
| LGM68_RS23275 (LGM68_23290) | 78767..80326 | - | 1560 | Protein_75 | transposase | - |
| LGM68_RS23280 (LGM68_23295) | 80496..81037 | + | 542 | Protein_76 | IS3-like element ISXac2 family transposase | - |
| LGM68_RS23285 (LGM68_23300) | 81078..82001 | - | 924 | WP_005934469.1 | recombinase family protein | - |
| LGM68_RS23290 (LGM68_23305) | 82209..82448 | + | 240 | WP_005934467.1 | ribbon-helix-helix domain-containing protein | - |
| LGM68_RS23295 (LGM68_23310) | 82448..82867 | + | 420 | WP_269338329.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LGM68_RS23300 (LGM68_23315) | 82872..85847 | + | 2976 | WP_269357795.1 | Tn3 family transposase | - |
| LGM68_RS23305 (LGM68_23320) | 85866..86564 | + | 699 | WP_033836401.1 | YecA family protein | - |
| LGM68_RS23310 (LGM68_23325) | 86608..86790 | + | 183 | Protein_82 | transposase | - |
| LGM68_RS23315 (LGM68_23330) | 87117..87254 | - | 138 | WP_005918231.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|