MGE detailed information
MGE type: Genomic_island MGE length: 21172 bp
Accession: NZ_CP090561 Location: 2742375..2763546 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Accession: NZ_CP090561 Location: 2742375..2763546 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM68_RS11715 (LGM68_11720) | 2737804..2738775 | - | 972 | WP_095702082.1 | IS1595-like element IS1595 family transposase | - |
| LGM68_RS11720 (LGM68_11725) | 2739166..2741670 | + | 2505 | WP_005918046.1 | type III secretion system effector protein XopC | - |
| LGM68_RS11725 (LGM68_11730) | 2742106..2742306 | - | 201 | Protein_2295 | avirulence protein | - |
| LGM68_RS11730 (LGM68_11735) | 2742375..2743477 | + | 1103 | WP_269355251.1 | IS3 family transposase IS1389 | Transposase |
| LGM68_RS11735 (LGM68_11740) | 2743511..2744389 | - | 879 | Protein_2297 | XopE/AvrPphe family type III secretion system effector | - |
| LGM68_RS11740 (LGM68_11750) | 2744523..2744819 | - | 297 | Protein_2298 | integrase | - |
| LGM68_RS11745 (LGM68_11755) | 2744876..2745190 | + | 315 | WP_033836454.1 | IS3 family transposase ISKpn40 | Transposase |
| LGM68_RS11750 (LGM68_11760) | 2745346..2746008 | + | 663 | WP_269355252.1 | IS3 family transposase ISKpn40 | Transposase |
| LGM68_RS11755 (LGM68_11765) | 2746036..2746447 | - | 412 | Protein_2301 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| LGM68_RS11760 (LGM68_11770) | 2746824..2747864 | + | 1041 | WP_033474620.1 | IS21 family transposase ISRme20 | Transposase |
| LGM68_RS11765 (LGM68_11775) | 2747864..2748664 | + | 801 | WP_017154874.1 | IS21 family transposase ISRme20 | Transposase |
| LGM68_RS11770 (LGM68_11780) | 2748731..2748892 | + | 162 | WP_232514322.1 | hypothetical protein | - |
| LGM68_RS11775 (LGM68_11785) | 2748886..2749158 | + | 273 | WP_005918020.1 | IS66 family transposase ISAzo15 | Transposase |
| LGM68_RS11780 (LGM68_11790) | 2749347..2749547 | + | 201 | WP_005934416.1 | IS66 family transposase ISAzo15 | Transposase |
| LGM68_RS11785 (LGM68_11795) | 2749668..2750300 | - | 633 | WP_197974735.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| LGM68_RS11790 (LGM68_11800) | 2750643..2751698 | - | 1056 | WP_033836455.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| LGM68_RS11795 (LGM68_11805) | 2751882..2753156 | + | 1275 | WP_005923972.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| LGM68_RS11800 (LGM68_11810) | 2753165..2756161 | + | 2997 | WP_269355253.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| LGM68_RS11805 (LGM68_11815) | 2756209..2756556 | - | 348 | Protein_2311 | hypothetical protein | - |
| LGM68_RS11815 (LGM68_11825) | 2758416..2759792 | - | 1377 | WP_078565984.1 | IS5 family transposase ISXca5 | Transposase |
| LGM68_RS11820 (LGM68_11830) | 2759690..2761126 | - | 1437 | WP_269355254.1 | replication protein RepA | - |
| LGM68_RS11825 (LGM68_11835) | 2761406..2762593 | - | 1188 | WP_269355255.1 | zeta toxin family protein | - |
| LGM68_RS11830 (LGM68_11840) | 2762600..2762863 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| LGM68_RS11835 (LGM68_11845) | 2762888..2763277 | - | 390 | WP_223301037.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LGM68_RS11840 (LGM68_11850) | 2763286..2763546 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LGM68_RS11845 (LGM68_11855) | 2763896..2767180 | + | 3285 | WP_095702083.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS11850 (LGM68_11860) | 2767365..2768216 | - | 852 | WP_269355256.1 | putative addiction module antidote protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|