MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 19198 bp
Accession: NZ_CP090508 Location: 1147226..1166423 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Accession: NZ_CP090508 Location: 1147226..1166423 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ758_RS05250 (LZ758_05250) | 1142679..1145060 | - | 2382 | WP_234056350.1 | TonB-dependent receptor | - |
| LZ758_RS05255 (LZ758_05255) | 1145222..1147159 | + | 1938 | WP_038230066.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| LZ758_RS05260 (LZ758_05260) | 1147226..1148245 | - | 1020 | WP_038230604.1 | hypothetical protein ; Integrase | Integrase |
| LZ758_RS05265 (LZ758_05265) | 1148235..1148492 | - | 258 | WP_016024069.1 | DUF4224 domain-containing protein | - |
| LZ758_RS05270 (LZ758_05270) | 1148485..1148649 | - | 165 | WP_016024070.1 | hypothetical protein | - |
| LZ758_RS05275 (LZ758_05275) | 1148646..1150064 | - | 1419 | WP_234056349.1 | DEAD/DEAH box helicase | - |
| LZ758_RS05280 (LZ758_05280) | 1150149..1150457 | + | 309 | WP_011097621.1 | hypothetical protein | - |
| LZ758_RS05285 (LZ758_05285) | 1150459..1150737 | - | 279 | WP_004085028.1 | VRR-NUC domain-containing protein | - |
| LZ758_RS05290 (LZ758_05290) | 1150734..1151351 | - | 618 | WP_234056348.1 | hypothetical protein | - |
| LZ758_RS05295 (LZ758_05295) | 1151377..1151950 | + | 574 | Protein_1042 | IS607 family transposase ISCfe1 | Transposase |
| LZ758_RS05300 (LZ758_05300) | 1151944..1152105 | + | 162 | WP_014607806.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ758_RS05305 (LZ758_05305) | 1152270..1153013 | + | 744 | WP_230577707.1 | IS607 family transposase ISCARN56 | Transposase |
| LZ758_RS05310 (LZ758_05310) | 1152917..1153150 | + | 234 | WP_230577706.1 | transposase | - |
| LZ758_RS05315 (LZ758_05315) | 1153167..1153400 | + | 234 | WP_038230061.1 | DUF3383 family protein | - |
| LZ758_RS05320 (LZ758_05320) | 1153410..1153847 | + | 438 | WP_234056347.1 | DUF3277 family protein | - |
| LZ758_RS05325 (LZ758_05325) | 1153844..1154266 | + | 423 | WP_234056346.1 | putative phage tail assembly chaperone | - |
| LZ758_RS05330 (LZ758_05330) | 1154293..1154457 | + | 165 | WP_196242993.1 | hypothetical protein | - |
| LZ758_RS05335 (LZ758_05335) | 1154516..1155502 | + | 987 | WP_234056345.1 | phage tail tape measure protein | - |
| LZ758_RS05340 (LZ758_05340) | 1155499..1156218 | + | 720 | WP_230577703.1 | hypothetical protein | - |
| LZ758_RS05345 (LZ758_05345) | 1156237..1156641 | - | 405 | WP_038230656.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LZ758_RS05350 (LZ758_05350) | 1156638..1156925 | - | 288 | WP_230577702.1 | antitoxin | Antitoxin Detail |
| LZ758_RS05355 (LZ758_05355) | 1157070..1157375 | + | 306 | WP_230577600.1 | hypothetical protein | - |
| LZ758_RS05360 (LZ758_05360) | 1157519..1157839 | + | 321 | WP_234509108.1 | hypothetical protein | - |
| LZ758_RS05365 (LZ758_05365) | 1157839..1158156 | + | 318 | WP_012382585.1 | hypothetical protein | - |
| LZ758_RS05370 (LZ758_05370) | 1158153..1158983 | + | 831 | WP_038230303.1 | hypothetical protein | - |
| LZ758_RS05375 (LZ758_05375) | 1158980..1159621 | + | 642 | WP_012382583.1 | Gp138 family membrane-puncturing spike protein | - |
| LZ758_RS05380 (LZ758_05380) | 1159618..1159971 | + | 354 | WP_040123185.1 | hypothetical protein | - |
| LZ758_RS05385 (LZ758_05385) | 1160109..1160348 | + | 240 | WP_011097871.1 | antitoxin | - |
| LZ758_RS05390 (LZ758_05390) | 1160357..1160665 | + | 309 | WP_004089386.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LZ758_RS05395 (LZ758_05395) | 1160815..1161960 | + | 1146 | WP_038230314.1 | baseplate J/gp47 family protein | - |
| LZ758_RS05400 (LZ758_05400) | 1161957..1162517 | + | 561 | WP_038230308.1 | DUF2612 domain-containing protein | - |
| LZ758_RS05405 (LZ758_05405) | 1162521..1163765 | + | 1245 | WP_234509120.1 | tail fiber protein | - |
| LZ758_RS05410 (LZ758_05410) | 1163869..1164315 | - | 447 | WP_020852919.1 | hypothetical protein | - |
| LZ758_RS05415 (LZ758_05415) | 1164574..1165551 | - | 978 | WP_038229560.1 | ABC transporter permease | - |
| LZ758_RS05420 (LZ758_05420) | 1165548..1166423 | - | 876 | WP_038229562.1 | ABC transporter ATP-binding protein | - |
| LZ758_RS05425 (LZ758_05425) | 1167168..1167752 | + | 585 | WP_080679690.1 | glutathione peroxidase | - |
| LZ758_RS05430 (LZ758_05430) | 1168412..1169368 | + | 957 | WP_038229564.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| LZ758_RS05435 (LZ758_05435) | 1169394..1170746 | + | 1353 | WP_038229566.1 | UDP-glucose/GDP-mannose dehydrogenase family protein | - |
| LZ758_RS05440 (LZ758_05440) | 1170739..1170975 | + | 237 | WP_004087333.1 | SlyX family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|