MGE detailed information
MGE type: Genomic_island MGE length: 20185 bp
Accession: NZ_CP090378 Location: 749803..769987 Organism: Vibrio cholerae strain BY369 Replicon: chromosome
Accession: NZ_CP090378 Location: 749803..769987 Organism: Vibrio cholerae strain BY369 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ30_RS03515 (LVJ30_03520) | 746490..748310 | + | 1821 | WP_000661887.1 | conjugative transfer system coupling protein TraD | - |
| LVJ30_RS03520 (LVJ30_03525) | 748320..748880 | + | 561 | WP_000546510.1 | hypothetical protein | - |
| LVJ30_RS03525 (LVJ30_03530) | 748867..749502 | + | 636 | WP_000033753.1 | DUF4400 domain-containing protein | - |
| LVJ30_RS03530 (LVJ30_03535) | 749528..749806 | - | 279 | WP_000058216.1 | helix-turn-helix transcriptional regulator | - |
| LVJ30_RS03535 (LVJ30_03540) | 749803..750126 | - | 324 | WP_000118545.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LVJ30_RS03540 (LVJ30_03545) | 750307..750588 | + | 282 | WP_000433889.1 | type IV conjugative transfer system protein TraL | - |
| LVJ30_RS03545 (LVJ30_03550) | 750585..751211 | + | 627 | WP_000667169.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LVJ30_RS03550 (LVJ30_03555) | 751195..752091 | + | 897 | WP_032467354.1 | type-F conjugative transfer system secretin TraK | - |
| LVJ30_RS03555 (LVJ30_03560) | 752094..753383 | + | 1290 | WP_001883765.1 | TraB/VirB10 family protein | - |
| LVJ30_RS03560 (LVJ30_03565) | 753458..754030 | + | 573 | WP_139057167.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LVJ30_RS03565 (LVJ30_03570) | 754027..754413 | + | 387 | WP_000180225.1 | TraA family conjugative transfer protein | - |
| LVJ30_RS03570 (LVJ30_03575) | 754634..755425 | + | 792 | WP_000095577.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| LVJ30_RS03575 (LVJ30_03580) | 755418..756356 | + | 939 | WP_000356587.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ30_RS03580 (LVJ30_03585) | 756488..757180 | + | 693 | WP_001228924.1 | DsbC family protein | - |
| LVJ30_RS03585 (LVJ30_03590) | 757180..759579 | + | 2400 | WP_000648041.1 | type IV secretion system protein TraC | - |
| LVJ30_RS03590 (LVJ30_03595) | 759572..759919 | + | 348 | WP_001044650.1 | hypothetical protein | - |
| LVJ30_RS03595 (LVJ30_03600) | 759903..760415 | + | 513 | WP_001166556.1 | S26 family signal peptidase | - |
| LVJ30_RS03600 (LVJ30_03605) | 760426..761550 | + | 1125 | WP_025989328.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LVJ30_RS03605 (LVJ30_03610) | 761534..762562 | + | 1029 | WP_000735887.1 | TraU family protein | - |
| LVJ30_RS03610 (LVJ30_03615) | 762565..766263 | + | 3699 | WP_000805218.1 | conjugal transfer protein TraN | - |
| LVJ30_RS03615 (LVJ30_03620) | 766356..767036 | - | 681 | WP_000838013.1 | hypothetical protein | - |
| LVJ30_RS03620 (LVJ30_03625) | 767043..767669 | - | 627 | WP_233195485.1 | hypothetical protein | - |
| LVJ30_RS03625 (LVJ30_03630) | 767771..768127 | - | 357 | WP_233195486.1 | hypothetical protein | - |
| LVJ30_RS03630 (LVJ30_03635) | 768127..769191 | - | 1065 | WP_000852158.1 | hypothetical protein | - |
| LVJ30_RS03635 (LVJ30_03640) | 769304..769987 | - | 684 | WP_001082329.1 | endonuclease | - |
| LVJ30_RS03640 (LVJ30_03645) | 770128..770730 | - | 603 | WP_000035786.1 | hypothetical protein | - |
| LVJ30_RS03645 (LVJ30_03650) | 771098..771424 | + | 327 | WP_000455721.1 | hypothetical protein | - |
| LVJ30_RS03650 (LVJ30_03655) | 771440..771859 | + | 420 | WP_000795987.1 | single-stranded DNA-binding protein | - |
| LVJ30_RS03655 (LVJ30_03660) | 771939..772757 | + | 819 | WP_000414661.1 | phage recombination protein Bet | - |
| LVJ30_RS03660 (LVJ30_03665) | 772839..772982 | + | 144 | WP_000167275.1 | hypothetical protein | - |
| LVJ30_RS03665 (LVJ30_03670) | 773043..774059 | + | 1017 | WP_000862954.1 | YqaJ viral recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|