MGE detailed information
MGE type: Conjugative plasmid MGE length: 140306 bp
Accession: NZ_CP090205 Location: 1..140306 Organism: Klebsiella pneumoniae strain JNKPN26 Replicon: plasmid pJNKPN26_NDM
Accession: NZ_CP090205 Location: 1..140306 Organism: Klebsiella pneumoniae strain JNKPN26 Replicon: plasmid pJNKPN26_NDM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXM99_RS27930 (LXM99_27930) | 1016..1546 | - | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| LXM99_RS27935 (LXM99_27935) | 1543..1860 | - | 318 | WP_000351984.1 | hypothetical protein | - |
| LXM99_RS27940 (LXM99_27940) | 1875..4322 | - | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| LXM99_RS27945 (LXM99_27945) | 4319..5026 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| LXM99_RS27950 (LXM99_27950) | 5175..10661 | - | 5487 | WP_000606835.1 | Ig-like domain-containing protein | - |
| LXM99_RS27955 (LXM99_27955) | 11389..11706 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| LXM99_RS27960 (LXM99_27960) | 11703..12236 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| LXM99_RS27965 (LXM99_27965) | 12330..13475 | - | 1146 | WP_015058212.1 | Beta-lactamase | ARG |
| LXM99_RS27970 (LXM99_27970) | 13799..15060 | - | 1262 | Protein_9 | IS1380 family transposase ISEcp1 | Transposase |
| LXM99_RS27975 (LXM99_27975) | 15345..15737 | - | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| LXM99_RS27980 (LXM99_27980) | 15741..16319 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LXM99_RS27985 (LXM99_27985) | 16316..17629 | - | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| LXM99_RS27990 (LXM99_27990) | 17629..18546 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| LXM99_RS27995 (LXM99_27995) | 18530..19156 | - | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LXM99_RS28000 (LXM99_28000) | 19153..19434 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| LXM99_RS28005 (LXM99_28005) | 19579..19944 | - | 366 | WP_001052530.1 | hypothetical protein | - |
| LXM99_RS28010 (LXM99_28010) | 19956..20099 | - | 144 | WP_001275801.1 | hypothetical protein | - |
| LXM99_RS28015 (LXM99_28015) | 20280..20942 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| LXM99_RS28020 (LXM99_28020) | 20942..21319 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| LXM99_RS28025 (LXM99_28025) | 21329..21775 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| LXM99_RS28030 (LXM99_28030) | 21785..22414 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| LXM99_RS28035 (LXM99_28035) | 22371..22916 | - | 546 | WP_000228720.1 | hypothetical protein | - |
| LXM99_RS28040 (LXM99_28040) | 22966..24831 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| LXM99_RS28045 (LXM99_28045) | 24828..27800 | - | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| LXM99_RS28050 (LXM99_28050) | 27968..28585 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| LXM99_RS28055 (LXM99_28055) | 28567..28800 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| LXM99_RS28060 (LXM99_28060) | 28800..30992 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| LXM99_RS28065 (LXM99_28065) | 31007..31495 | + | 489 | WP_004201072.1 | hypothetical protein | - |
| LXM99_RS28070 (LXM99_28070) | 31586..31864 | - | 279 | WP_000746034.1 | hypothetical protein | - |
| LXM99_RS28075 (LXM99_28075) | 32097..32714 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| LXM99_RS28080 (LXM99_28080) | 32770..33426 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| LXM99_RS28085 (LXM99_28085) | 33426..34853 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| LXM99_RS28090 (LXM99_28090) | 34857..35357 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| LXM99_RS28095 (LXM99_28095) | 35366..35677 | - | 312 | WP_002210541.1 | hypothetical protein | - |
| LXM99_RS28100 (LXM99_28100) | 35683..36189 | - | 507 | WP_000566443.1 | hypothetical protein | - |
| LXM99_RS28105 (LXM99_28105) | 36182..36856 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| LXM99_RS28110 (LXM99_28110) | 36831..37112 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| LXM99_RS28115 (LXM99_28115) | 37105..37482 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| LXM99_RS28120 (LXM99_28120) | 37809..37952 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| LXM99_RS28125 (LXM99_28125) | 38044..38679 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| LXM99_RS28130 (LXM99_28130) | 38732..39004 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| LXM99_RS28135 (LXM99_28135) | 39053..40234 | - | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| LXM99_RS28140 (LXM99_28140) | 40238..41023 | - | 786 | WP_001151305.1 | Sporulation initiation inhibitor protein Soj | VF |
| LXM99_RS28145 (LXM99_28145) | 41197..41508 | - | 312 | WP_000380893.1 | hypothetical protein | - |
| LXM99_RS28150 (LXM99_28150) | 41490..41939 | - | 450 | WP_001053910.1 | hypothetical protein | - |
| LXM99_RS28155 (LXM99_28155) | 41953..43197 | - | 1245 | WP_000098294.1 | site-specific DNA-methyltransferase | - |
| LXM99_RS28160 (LXM99_28160) | 43190..43552 | - | 363 | WP_001258026.1 | hypothetical protein | - |
| LXM99_RS28165 (LXM99_28165) | 43555..43797 | - | 243 | WP_001096360.1 | hypothetical protein | - |
| LXM99_RS28170 (LXM99_28170) | 44232..45170 | - | 939 | WP_000268394.1 | chromosome partitioning protein ParB | - |
| LXM99_RS28175 (LXM99_28175) | 45287..45832 | - | 546 | WP_000435225.1 | hypothetical protein | - |
| LXM99_RS28180 (LXM99_28180) | 45835..46404 | - | 570 | WP_001256126.1 | hypothetical protein | - |
| LXM99_RS28185 (LXM99_28185) | 46416..46979 | - | 564 | WP_000004671.1 | hypothetical protein | - |
| LXM99_RS28190 (LXM99_28190) | 46972..47400 | - | 429 | WP_000988988.1 | hypothetical protein | - |
| LXM99_RS28195 (LXM99_28195) | 47397..47744 | - | 348 | WP_000039129.1 | hypothetical protein | - |
| LXM99_RS28200 (LXM99_28200) | 47756..48889 | - | 1134 | WP_223369384.1 | hypothetical protein | - |
| LXM99_RS28205 (LXM99_28205) | 48934..49128 | - | 195 | WP_000757530.1 | DUF2997 domain-containing protein | - |
| LXM99_RS28210 (LXM99_28210) | 49177..49569 | - | 393 | WP_000018404.1 | hypothetical protein | - |
| LXM99_RS28215 (LXM99_28215) | 49631..51094 | - | 1464 | WP_004201081.1 | AAA family ATPase | - |
| LXM99_RS28220 (LXM99_28220) | 51168..52100 | - | 933 | WP_000434070.1 | hypothetical protein | - |
| LXM99_RS28225 (LXM99_28225) | 52662..53159 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| LXM99_RS28230 (LXM99_28230) | 53162..53650 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| LXM99_RS28235 (LXM99_28235) | 53747..54082 | + | 336 | WP_000683477.1 | hypothetical protein | - |
| LXM99_RS28240 (LXM99_28240) | 54097..54567 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| LXM99_RS28245 (LXM99_28245) | 54560..54931 | - | 372 | WP_000516918.1 | hypothetical protein | - |
| LXM99_RS28250 (LXM99_28250) | 54942..55136 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| LXM99_RS28255 (LXM99_28255) | 55477..56025 | - | 549 | WP_001061573.1 | hypothetical protein | - |
| LXM99_RS28260 (LXM99_28260) | 56188..56538 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LXM99_RS28265 (LXM99_28265) | 56543..56845 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LXM99_RS28270 (LXM99_28270) | 56872..57165 | - | 294 | WP_001239998.1 | hypothetical protein | - |
| LXM99_RS28275 (LXM99_28275) | 57254..57526 | - | 273 | WP_001043046.1 | HU family DNA-binding protein | - |
| LXM99_RS28280 (LXM99_28280) | 57584..58111 | - | 528 | WP_004201083.1 | thermonuclease family protein | - |
| LXM99_RS28285 (LXM99_28285) | 58114..58305 | - | 192 | WP_001270409.1 | hypothetical protein | - |
| LXM99_RS28290 (LXM99_28290) | 58331..59188 | - | 858 | WP_001167036.1 | hypothetical protein | - |
| LXM99_RS28295 (LXM99_28295) | 59175..59405 | - | 231 | WP_000972665.1 | hypothetical protein | - |
| LXM99_RS28300 (LXM99_28300) | 59405..59923 | - | 519 | WP_000210757.1 | nitrite reductase | - |
| LXM99_RS28305 (LXM99_28305) | 59920..60366 | - | 447 | WP_000919343.1 | hypothetical protein | - |
| LXM99_RS28310 (LXM99_28310) | 60366..60725 | - | 360 | WP_000422769.1 | hypothetical protein | - |
| LXM99_RS28315 (LXM99_28315) | 60783..61211 | - | 429 | WP_000591076.1 | hypothetical protein | - |
| LXM99_RS28320 (LXM99_28320) | 61245..62105 | - | 861 | WP_004201087.1 | DsbA family protein | - |
| LXM99_RS28325 (LXM99_28325) | 62121..63080 | - | 960 | WP_000829617.1 | S49 family peptidase | - |
| LXM99_RS28330 (LXM99_28330) | 63080..63934 | - | 855 | WP_000539391.1 | hypothetical protein | - |
| LXM99_RS28335 (LXM99_28335) | 63939..64232 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| LXM99_RS28340 (LXM99_28340) | 64243..64716 | - | 474 | WP_000057876.1 | hypothetical protein | - |
| LXM99_RS28345 (LXM99_28345) | 64813..65334 | - | 522 | WP_000648873.1 | hypothetical protein | - |
| LXM99_RS28350 (LXM99_28350) | 65337..65858 | - | 522 | WP_000393783.1 | hypothetical protein | - |
| LXM99_RS28355 (LXM99_28355) | 65863..66471 | - | 609 | WP_000849069.1 | hypothetical protein | - |
| LXM99_RS28360 (LXM99_28360) | 66739..67854 | + | 1116 | WP_000946104.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LXM99_RS28365 (LXM99_28365) | 67872..68306 | + | 435 | WP_004201092.1 | hypothetical protein | - |
| LXM99_RS28370 (LXM99_28370) | 69343..70443 | - | 1101 | WP_001348532.1 | RepB family plasmid replication initiator protein | - |
| LXM99_RS28375 (LXM99_28375) | 70428..70715 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| LXM99_RS28380 (LXM99_28380) | 70720..71259 | - | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
| LXM99_RS28385 (LXM99_28385) | 71758..72741 | + | 984 | WP_000077457.1 | ParM/StbA family protein | - |
| LXM99_RS28390 (LXM99_28390) | 72758..73051 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| LXM99_RS28395 (LXM99_28395) | 73053..73472 | + | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| LXM99_RS28400 (LXM99_28400) | 73532..74083 | - | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| LXM99_RS28405 (LXM99_28405) | 74080..74688 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| LXM99_RS28410 (LXM99_28410) | 74699..75232 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| LXM99_RS28415 (LXM99_28415) | 75232..75504 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| LXM99_RS28420 (LXM99_28420) | 76220..76582 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| LXM99_RS28425 (LXM99_28425) | 76620..80234 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LXM99_RS28430 (LXM99_28430) | 80247..81680 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| LXM99_RS28435 (LXM99_28435) | 81682..82722 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| LXM99_RS28440 (LXM99_28440) | 82833..84344 | - | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| LXM99_RS28450 (LXM99_28450) | 86009..86977 | - | 969 | Protein_105 | DNA-binding protein | - |
| LXM99_RS28455 (LXM99_28455) | 87130..88005 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| LXM99_RS28460 (LXM99_28460) | 88322..88813 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| LXM99_RS28465 (LXM99_28465) | 88810..89679 | - | 870 | WP_004201184.1 | 3'-5' exonuclease | - |
| LXM99_RS28470 (LXM99_28470) | 89684..90694 | - | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| LXM99_RS28475 (LXM99_28475) | 90697..91233 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| LXM99_RS28480 (LXM99_28480) | 91532..91813 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| LXM99_RS28485 (LXM99_28485) | 92083..92685 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| LXM99_RS28490 (LXM99_28490) | 92701..93153 | - | 453 | WP_000791469.1 | hypothetical protein | - |
| LXM99_RS28495 (LXM99_28495) | 93324..93746 | - | 423 | WP_001165345.1 | hypothetical protein | - |
| LXM99_RS28500 (LXM99_28500) | 93736..96234 | - | 2499 | Protein_115 | tRNA(Glu)-specific nuclease WapA | VF |
| LXM99_RS28505 (LXM99_28505) | 96206..96772 | - | 567 | Protein_116 | IS91 family transposase ISPps1 | Transposase |
| LXM99_RS28510 (LXM99_28510) | 96997..98637 | - | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| LXM99_RS28515 (LXM99_28515) | 98693..98983 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| LXM99_RS28520 (LXM99_28520) | 99177..99506 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| LXM99_RS28525 (LXM99_28525) | 99511..99885 | + | 375 | Protein_120 | protein-disulfide reductase DsbD family protein | - |
| LXM99_RS28530 (LXM99_28530) | 99985..100542 | + | 558 | Protein_121 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| LXM99_RS28535 (LXM99_28535) | 100553..101191 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| LXM99_RS28540 (LXM99_28540) | 101196..101561 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| LXM99_RS28545 (LXM99_28545) | 101565..102377 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| LXM99_RS28555 (LXM99_28555) | 103582..104427 | + | 846 | WP_000855769.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| LXM99_RS28560 (LXM99_28560) | 104525..105178 | - | 654 | WP_004201046.1 | endonuclease III | - |
| LXM99_RS28565 (LXM99_28565) | 105521..106072 | - | 552 | Protein_128 | DNA cytosine methyltransferase | - |
| LXM99_RS28570 (LXM99_28570) | 106405..106575 | + | 171 | WP_016479969.1 | hypothetical protein | - |
| LXM99_RS28575 (LXM99_28575) | 106689..106988 | + | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| LXM99_RS28580 (LXM99_28580) | 107114..107314 | - | 201 | Protein_131 | hypothetical protein | - |
| LXM99_RS28585 (LXM99_28585) | 107441..108280 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LXM99_RS28590 (LXM99_28590) | 108274..108621 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LXM99_RS28595 (LXM99_28595) | 108738..109583 | - | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| LXM99_RS28600 (LXM99_28600) | 109764..110237 | - | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| LXM99_RS28605 (LXM99_28605) | 110370..110822 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LXM99_RS28610 (LXM99_28610) | 110995..112008 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LXM99_RS28615 (LXM99_28615) | 112314..112871 | + | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LXM99_RS28620 (LXM99_28620) | 112874..115846 | + | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| LXM99_RS28625 (LXM99_28625) | 115925..116929 | + | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| LXM99_RS28630 (LXM99_28630) | 117111..117332 | - | 222 | WP_000714163.1 | hypothetical protein | - |
| LXM99_RS28635 (LXM99_28635) | 117405..117683 | - | 279 | WP_000268337.1 | hypothetical protein | - |
| LXM99_RS28640 (LXM99_28640) | 117670..119397 | - | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| LXM99_RS28645 (LXM99_28645) | 119575..119961 | - | 387 | WP_001077336.1 | hypothetical protein | - |
| LXM99_RS28650 (LXM99_28650) | 120420..121271 | - | 852 | WP_000595210.1 | hypothetical protein | - |
| LXM99_RS28655 (LXM99_28655) | 121346..121903 | - | 558 | WP_000064432.1 | hypothetical protein | - |
| LXM99_RS28660 (LXM99_28660) | 121977..122195 | - | 219 | WP_000260293.1 | hypothetical protein | - |
| LXM99_RS28665 (LXM99_28665) | 122209..122478 | - | 270 | WP_000184110.1 | hypothetical protein | - |
| LXM99_RS28670 (LXM99_28670) | 122471..123076 | - | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| LXM99_RS28675 (LXM99_28675) | 123148..123351 | - | 204 | WP_000050847.1 | hypothetical protein | - |
| LXM99_RS28680 (LXM99_28680) | 123406..123840 | - | 435 | WP_004200877.1 | hypothetical protein | - |
| LXM99_RS28685 (LXM99_28685) | 124105..124440 | - | 336 | WP_001447572.1 | hypothetical protein | - |
| LXM99_RS28690 (LXM99_28690) | 124502..126298 | - | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| LXM99_RS28695 (LXM99_28695) | 126383..127660 | - | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| LXM99_RS28700 (LXM99_28700) | 127860..128870 | - | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| LXM99_RS28705 (LXM99_28705) | 128933..129922 | - | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| LXM99_RS28710 (LXM99_28710) | 130017..130547 | - | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| LXM99_RS28715 (LXM99_28715) | 130608..131516 | - | 909 | WP_000739139.1 | hypothetical protein | - |
| LXM99_RS28720 (LXM99_28720) | 131527..132495 | - | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| LXM99_RS28725 (LXM99_28725) | 132715..132900 | - | 186 | WP_001186917.1 | hypothetical protein | - |
| LXM99_RS28730 (LXM99_28730) | 133204..133524 | - | 321 | WP_000547566.1 | hypothetical protein | - |
| LXM99_RS28735 (LXM99_28735) | 133819..134460 | + | 642 | WP_000796664.1 | hypothetical protein | - |
| LXM99_RS28740 (LXM99_28740) | 134583..135443 | + | 861 | WP_000709517.1 | hypothetical protein | - |
| LXM99_RS28745 (LXM99_28745) | 135482..138277 | - | 2796 | WP_001256484.1 | conjugal transfer mating pair stabilization protein TraN | - |
| LXM99_RS28750 (LXM99_28750) | 138393..139397 | - | 1005 | WP_005507569.1 | TraU family protein | - |
| LXM99_RS28755 (LXM99_28755) | 139397..140068 | - | 672 | WP_000575345.1 | EAL domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|