MGE detailed information
MGE type: Prophage MGE length: 51899 bp
Accession: NZ_CP090141 Location: 1961498..2013396 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain 5ASAL09 Replicon: chromosome
Accession: NZ_CP090141 Location: 1961498..2013396 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain 5ASAL09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZK30_RS09295 () | 1957771..1958412 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LZK30_RS09300 () | 1958512..1959690 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LZK30_RS09305 () | 1959821..1960111 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LZK30_RS09310 () | 1960179..1960532 | + | 354 | WP_001042119.1 | protein YebF | - |
| LZK30_RS09315 () | 1960626..1961285 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LZK30_RS09320 () | 1961498..1963549 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LZK30_RS09325 () | 1963586..1964284 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| LZK30_RS09330 () | 1964308..1964964 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| LZK30_RS09335 () | 1965072..1965302 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LZK30_RS09340 () | 1965440..1965814 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| LZK30_RS09345 () | 1965815..1966690 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| LZK30_RS09350 () | 1966707..1967060 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 1967162..1967305 | - | 144 | - | - | Antitoxin Detail |
| - | 1967200..1967303 | + | 104 | - | - | Toxin Detail |
| LZK30_RS09355 () | 1967434..1968084 | - | 651 | Protein_1827 | hypothetical protein ; Integrase | Integrase |
| LZK30_RS09360 () | 1968095..1968400 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| LZK30_RS09365 () | 1968357..1968560 | + | 204 | Protein_1829 | phage tail protein | - |
| LZK30_RS09370 () | 1968732..1968887 | + | 156 | Protein_1830 | DUF4376 domain-containing protein | - |
| LZK30_RS09375 () | 1968993..1969325 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| LZK30_RS09380 () | 1969374..1969483 | + | 110 | Protein_1832 | tail fiber assembly protein | - |
| LZK30_RS09385 () | 1969574..1969759 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| LZK30_RS09390 () | 1970011..1970199 | - | 189 | Protein_1834 | tail fiber assembly protein | - |
| LZK30_RS09395 () | 1970195..1970965 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| LZK30_RS09400 () | 1971035..1971133 | + | 99 | Protein_1836 | DUF4113 domain-containing protein | - |
| LZK30_RS09405 () | 1971456..1971584 | + | 129 | Protein_1837 | helix-turn-helix domain-containing protein | - |
| LZK30_RS09410 () | 1971613..1972413 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| LZK30_RS09415 () | 1973353..1973661 | - | 309 | Protein_1839 | hypothetical protein ; Integrase | Integrase |
| LZK30_RS09420 () | 1973660..1974024 | - | 365 | Protein_1840 | recombinase RecT | - |
| LZK30_RS09425 () | 1974021..1974131 | + | 111 | Protein_1841 | replication protein | - |
| LZK30_RS09430 () | 1974146..1974541 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| LZK30_RS09435 () | 1974828..1975622 | - | 795 | Protein_1843 | GGDEF domain-containing protein | - |
| LZK30_RS09440 () | 1975683..1976480 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| LZK30_RS09445 () | 1976480..1977652 | - | 1173 | WP_000952349.1 | IS21 family transposase IS21 | Transposase |
| LZK30_RS09450 () | 1977739..1978092 | - | 354 | WP_233932664.1 | membrane-associated sensor domain-containing protein | - |
| LZK30_RS09455 () | 1978488..1980467 | + | 1980 | WP_133322681.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LZK30_RS09460 () | 1980876..1981490 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| LZK30_RS09465 () | 1981500..1981658 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LZK30_RS09470 () | 1981791..1982705 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| LZK30_RS09475 () | 1983961..1984374 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| LZK30_RS09480 () | 1984498..1985706 | + | 1209 | Protein_1852 | IS256 family transposase ISEc39 | Transposase |
| LZK30_RS09485 () | 1985852..1985992 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LZK30_RS09490 () | 1986161..1986427 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| LZK30_RS09495 () | 1986797..1987216 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| LZK30_RS09500 () | 1987452..1987610 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| LZK30_RS09505 () | 1987634..1987882 | + | 249 | Protein_1857 | glycosyltransferase | - |
| LZK30_RS09510 () | 1987927..1988454 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| LZK30_RS09515 () | 1989432..1990170 | - | 739 | Protein_1859 | hypothetical protein ; Integrase | Integrase |
| LZK30_RS09520 () | 1990289..1991302 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| LZK30_RS09525 () | 1991999..1992202 | - | 204 | WP_024798203.1 | Outer membrane usher protein PapC | VF |
| LZK30_RS09530 () | 1992386..1992631 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| LZK30_RS09535 () | 1994260..1994736 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| LZK30_RS09540 () | 1995065..1995460 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| LZK30_RS09545 () | 1996208..1996930 | + | 723 | WP_126524018.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LZK30_RS09550 () | 1997215..1997379 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| LZK30_RS09555 () | 1997603..1998253 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| LZK30_RS09560 () | 1998272..1998463 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LZK30_RS09565 () | 1998574..1998810 | - | 237 | WP_024131167.1 | YebV family protein | - |
| LZK30_RS09570 () | 1998928..2000367 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LZK30_RS09575 () | 2000445..2003078 | - | 2634 | WP_001747692.1 | hypothetical protein | VF |
| LZK30_RS09580 () | 2003047..2004330 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| LZK30_RS09585 () | 2004459..2004956 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LZK30_RS09590 () | 2005054..2005740 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LZK30_RS09595 () | 2005760..2007808 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LZK30_RS09600 () | 2008002..2008883 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LZK30_RS09605 () | 2008931..2010304 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| LZK30_RS09610 () | 2010481..2011272 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| LZK30_RS09615 () | 2011484..2011723 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LZK30_RS09620 () | 2011881..2012024 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LZK30_RS09625 () | 2012095..2012382 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LZK30_RS09630 () | 2013031..2013174 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LZK30_RS09635 () | 2013187..2013396 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LZK30_RS09640 () | 2013616..2015361 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LZK30_RS09645 () | 2015427..2016236 | + | 810 | WP_000010924.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LZK30_RS09650 () | 2016233..2016799 | - | 567 | WP_126524021.1 | manganese efflux pump MntP | - |
| LZK30_RS09655 () | 2017209..2017667 | - | 459 | WP_126524022.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|