MGE detailed information
MGE type: Prophage MGE length: 52964 bp
Accession: NZ_CP090133 Location: 1945288..1998251 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain 5ASAL07 Replicon: chromosome
Accession: NZ_CP090133 Location: 1945288..1998251 Organism: Salmonella enterica subsp. enterica serovar Goldcoast strain 5ASAL07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZK29_RS09215 () | 1941025..1941477 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| LZK29_RS09220 () | 1941507..1942247 | + | 741 | WP_061380270.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LZK29_RS09225 () | 1942284..1942805 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LZK29_RS09230 () | 1942807..1943406 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| LZK29_RS09235 () | 1943616..1944308 | + | 693 | WP_058820964.1 | hypothetical protein | - |
| LZK29_RS09240 () | 1944668..1945279 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| LZK29_RS09245 () | 1945288..1946298 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LZK29_RS09250 () | 1946377..1947162 | - | 786 | WP_000571508.1 | Zinc transporter ZitB | VF |
| LZK29_RS09255 () | 1947159..1947914 | - | 756 | WP_133322679.1 | hypothetical protein | VF |
| LZK29_RS09260 () | 1947993..1948937 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LZK29_RS09265 () | 1948953..1950272 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| LZK29_RS09270 () | 1950389..1951360 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| LZK29_RS09275 () | 1951433..1952875 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| LZK29_RS09280 () | 1952999..1953868 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| LZK29_RS09285 () | 1954210..1955685 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| LZK29_RS09290 () | 1955920..1957731 | + | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| LZK29_RS09295 () | 1957769..1958410 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LZK29_RS09300 () | 1958510..1959688 | - | 1179 | WP_000173428.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LZK29_RS09305 () | 1959819..1960109 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LZK29_RS09310 () | 1960177..1960530 | + | 354 | WP_001042119.1 | protein YebF | - |
| LZK29_RS09315 () | 1960624..1961283 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| LZK29_RS09320 () | 1961496..1963547 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LZK29_RS09325 () | 1963584..1964282 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| LZK29_RS09330 () | 1964306..1964962 | - | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| LZK29_RS09335 () | 1965070..1965300 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LZK29_RS09340 () | 1965438..1965812 | + | 375 | WP_000168396.1 | CopC domain-containing protein YobA | - |
| LZK29_RS09345 () | 1965813..1966688 | + | 876 | WP_000979699.1 | copper homeostasis membrane protein CopD | - |
| LZK29_RS09350 () | 1966705..1967058 | + | 354 | WP_126524015.1 | YebY family protein | - |
| - | 1967160..1967303 | - | 144 | - | - | Antitoxin Detail |
| - | 1967198..1967301 | + | 104 | - | - | Toxin Detail |
| LZK29_RS09355 () | 1967432..1968082 | - | 651 | Protein_1827 | hypothetical protein ; Integrase | Integrase |
| LZK29_RS09360 () | 1968093..1968398 | + | 306 | WP_206519696.1 | hypothetical protein | - |
| LZK29_RS09365 () | 1968355..1968558 | + | 204 | Protein_1829 | phage tail protein | - |
| LZK29_RS09370 () | 1968730..1968885 | + | 156 | Protein_1830 | DUF4376 domain-containing protein | - |
| LZK29_RS09375 () | 1968991..1969323 | + | 333 | WP_061383450.1 | DUF1353 domain-containing protein | - |
| LZK29_RS09380 () | 1969372..1969481 | + | 110 | Protein_1832 | tail fiber assembly protein | - |
| LZK29_RS09385 () | 1969572..1969757 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| LZK29_RS09390 () | 1970009..1970197 | - | 189 | Protein_1834 | tail fiber assembly protein | - |
| LZK29_RS09395 () | 1970193..1970963 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| LZK29_RS09400 () | 1971033..1971131 | + | 99 | Protein_1836 | DUF4113 domain-containing protein | - |
| LZK29_RS09405 () | 1971454..1971582 | + | 129 | Protein_1837 | helix-turn-helix domain-containing protein | - |
| LZK29_RS09410 () | 1971611..1972411 | - | 801 | WP_079944157.1 | hypothetical protein | - |
| LZK29_RS09415 () | 1973351..1973659 | - | 309 | Protein_1839 | hypothetical protein ; Integrase | Integrase |
| LZK29_RS09420 () | 1973658..1974022 | - | 365 | Protein_1840 | recombinase RecT | - |
| LZK29_RS09425 () | 1974019..1974129 | + | 111 | Protein_1841 | replication protein | - |
| LZK29_RS09430 () | 1974144..1974539 | + | 396 | WP_024798200.1 | DUF977 family protein | - |
| LZK29_RS09435 () | 1974826..1975620 | - | 795 | Protein_1843 | GGDEF domain-containing protein | - |
| LZK29_RS09440 () | 1975681..1976478 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| LZK29_RS09445 () | 1976478..1977650 | - | 1173 | WP_000952349.1 | IS21 family transposase IS21 | Transposase |
| LZK29_RS09450 () | 1977737..1978090 | - | 354 | WP_233932664.1 | membrane-associated sensor domain-containing protein | - |
| LZK29_RS09455 () | 1978486..1980465 | + | 1980 | WP_133322681.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LZK29_RS09460 () | 1980874..1981488 | - | 615 | WP_126524017.1 | disulfide bond formation protein B | - |
| LZK29_RS09465 () | 1981498..1981656 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LZK29_RS09470 () | 1981789..1982703 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| LZK29_RS09475 () | 1983959..1984372 | - | 414 | WP_080094825.1 | hypothetical protein ; Integrase | Integrase |
| LZK29_RS09480 () | 1984496..1985704 | + | 1209 | Protein_1852 | IS256 family transposase ISEc39 | Transposase |
| LZK29_RS09485 () | 1985850..1985990 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LZK29_RS09490 () | 1986159..1986425 | - | 267 | WP_077248438.1 | hypothetical protein | - |
| LZK29_RS09495 () | 1986795..1987214 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| LZK29_RS09500 () | 1987450..1987608 | - | 159 | WP_072274730.1 | lipopolysaccharide 1,2-N-acetylglucosaminetransferase | - |
| LZK29_RS09505 () | 1987632..1987880 | + | 249 | Protein_1857 | glycosyltransferase | - |
| LZK29_RS09510 () | 1987925..1988452 | - | 528 | WP_167760988.1 | hypothetical protein | - |
| LZK29_RS09515 () | 1989430..1990168 | - | 739 | Protein_1859 | hypothetical protein ; Integrase | Integrase |
| LZK29_RS09520 () | 1990287..1991300 | - | 1014 | WP_071991613.1 | acyltransferase family protein | - |
| LZK29_RS09525 () | 1991997..1992200 | - | 204 | WP_024798203.1 | hypothetical protein | VF |
| LZK29_RS09530 () | 1992384..1992629 | - | 246 | WP_001051755.1 | hypothetical protein | - |
| LZK29_RS09535 () | 1994258..1994734 | - | 477 | WP_063809171.1 | hypothetical protein | - |
| LZK29_RS09540 () | 1995063..1995458 | - | 396 | WP_063809172.1 | DUF1398 domain-containing protein | - |
| LZK29_RS09545 () | 1996206..1996928 | + | 723 | WP_126524018.1 | Glucosamine-6-phosphate deaminase | VF |
| LZK29_RS09550 () | 1997213..1997377 | + | 165 | WP_001134853.1 | hypothetical protein | - |
| LZK29_RS09555 () | 1997601..1998251 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| LZK29_RS09560 () | 1998270..1998461 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LZK29_RS09565 () | 1998572..1998808 | - | 237 | WP_024131167.1 | YebV family protein | - |
| LZK29_RS09570 () | 1998926..2000365 | - | 1440 | WP_126524019.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LZK29_RS09575 () | 2000443..2003076 | - | 2634 | WP_001747692.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|