MGE detailed information
MGE type: Prophage MGE length: 45912 bp
Accession: NZ_CP089927 Location: 4355431..4401342 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Accession: NZ_CP089927 Location: 4355431..4401342 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV451_RS20540 | 4351624..4352895 | - | 1272 | WP_003404747.1 | PPE family protein | - |
| LV451_RS20545 | 4352910..4353209 | - | 300 | WP_003404748.1 | PE family protein | - |
| LV451_RS20550 | 4353653..4355434 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| LV451_RS20555 | 4355434..4355688 | + | 255 | WP_003898646.1 | hypothetical protein | - |
| LV451_RS20560 | 4355777..4356253 | + | 477 | WP_003898647.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LV451_RS20565 | 4356250..4356750 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LV451_RS20575 | 4357063..4358382 | - | 1320 | WP_003404757.1 | IS256-like element IS1554 family transposase | - |
| LV451_RS20580 | 4358670..4359251 | + | 582 | WP_003404760.1 | IS607-like element IS1535 family transposase | - |
| LV451_RS20585 | 4359251..4360903 | + | 1653 | WP_003404761.1 | IS607 family element RNA-guided endonuclease TnpB | - |
| LV451_RS20590 | 4361079..4362143 | - | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| LV451_RS20595 | 4362144..4363430 | - | 1287 | WP_003898649.1 | Nramp family divalent metal transporter | - |
| LV451_RS20600 | 4363462..4364199 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| LV451_RS20605 | 4364276..4365352 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| LV451_RS20610 | 4365406..4366197 | - | 792 | WP_003404769.1 | SDR family oxidoreductase | - |
| LV451_RS20615 | 4366469..4367581 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LV451_RS20620 | 4367594..4368568 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| LV451_RS20625 | 4368565..4369479 | + | 915 | WP_003915879.1 | phosphate ABC transporter permease PstA | - |
| LV451_RS20630 | 4369486..4371480 | - | 1995 | WP_003404782.1 | serine/threonine protein kinase PknD | - |
| LV451_RS20635 | 4371502..4372614 | - | 1113 | WP_003898652.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LV451_RS20640 | 4372830..4373660 | + | 831 | WP_003898653.1 | phosphate ABC transporter ATP-binding protein | - |
| LV451_RS20645 | 4373681..4374805 | + | 1125 | WP_003900236.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LV451_RS20650 | 4374865..4375881 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| LV451_RS20655 | 4375883..4376788 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| LV451_RS20660 | 4376765..4377586 | - | 822 | WP_003404795.1 | Ku protein | - |
| LV451_RS20665 | 4377702..4379981 | + | 2280 | WP_003911307.1 | ATP-dependent DNA ligase | - |
| LV451_RS20670 | 4379978..4381912 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| LV451_RS20675 | 4382159..4383025 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| LV451_RS20680 | 4383110..4383883 | - | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| LV451_RS20685 | 4383926..4384204 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| LV451_RS20690 | 4384262..4385302 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| LV451_RS20695 | 4385331..4385807 | + | 477 | WP_003404828.1 | zinc finger domain-containing protein | - |
| LV451_RS20700 | 4385825..4386574 | + | 750 | WP_003911341.1 | SDR family oxidoreductase | - |
| LV451_RS20705 | 4386590..4388251 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| LV451_RS20710 | 4388866..4389096 | - | 231 | WP_003404833.1 | mycolyltransferase | - |
| LV451_RS20715 | 4389013..4389207 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| LV451_RS20720 | 4389212..4389529 | - | 318 | WP_003404838.1 | chorismate mutase | - |
| LV451_RS20725 | 4389826..4392141 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| LV451_RS20730 | 4392222..4393220 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| LV451_RS20735 | 4393530..4394693 | + | 1164 | WP_003898659.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| LV451_RS20740 | 4394715..4395617 | + | 903 | WP_009935735.1 | succinate--CoA ligase subunit alpha | - |
| LV451_RS20745 | 4395680..4396528 | - | 849 | WP_003404873.1 | LLM class F420-dependent oxidoreductase | - |
| LV451_RS20750 | 4396693..4397604 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| LV451_RS20755 | 4397644..4399011 | + | 1368 | WP_003901049.1 | DUF6350 family protein | - |
| LV451_RS20760 | 4399127..4399774 | + | 648 | WP_003898661.1 | phosphoribosylglycinamide formyltransferase | - |
| LV451_RS20765 | 4399771..4401342 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| LV451_RS20770 | 4401449..4402828 | + | 1380 | WP_009935682.1 | sigma 54-interacting transcriptional regulator | - |
| LV451_RS20775 | 4402821..4404839 | + | 2019 | WP_003404895.1 | VWA domain-containing protein | - |
| LV451_RS20780 | 4404893..4405114 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| LV451_RS20785 | 4405111..4405494 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|