MGE detailed information
MGE type: Genomic_island MGE length: 55968 bp
Accession: NZ_CP089797 Location: 3596741..3652708 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00790 Replicon: chromosome
Accession: NZ_CP089797 Location: 3596741..3652708 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00790 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUY11_RS17555 () | 3592373..3594817 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LUY11_RS17560 () | 3594926..3595693 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LUY11_RS17565 () | 3596003..3596410 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LUY11_RS17570 () | 3596741..3597460 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| LUY11_RS17575 () | 3597464..3597652 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| LUY11_RS17580 () | 3597688..3597821 | + | 134 | Protein_3442 | transposase | - |
| LUY11_RS17585 () | 3598423..3599040 | - | 618 | WP_000241747.1 | protein TioA | - |
| LUY11_RS17590 () | 3599180..3599635 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| LUY11_RS17595 () | 3599768..3600847 | - | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| LUY11_RS17600 () | 3600870..3603557 | - | 2688 | WP_052939571.1 | hypothetical protein | VF |
| LUY11_RS17605 () | 3603666..3604184 | - | 519 | WP_232660199.1 | CFA/I fimbrial subunit B | VF |
| LUY11_RS17610 () | 3604292..3605002 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| LUY11_RS17615 () | 3606038..3606595 | + | 558 | Protein_3449 | IS21 family transposase ISEc62 | Transposase |
| LUY11_RS17620 () | 3606635..3606821 | - | 187 | Protein_3450 | transposase | - |
| LUY11_RS17625 () | 3606902..3607021 | - | 120 | Protein_3451 | hypothetical protein | - |
| LUY11_RS17630 () | 3607141..3608088 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LUY11_RS17635 () | 3608581..3608821 | - | 241 | Protein_3453 | PerC family transcriptional regulator | - |
| LUY11_RS17640 () | 3608904..3609725 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| LUY11_RS17645 () | 3610133..3610603 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LUY11_RS17650 () | 3610625..3613135 | - | 2511 | WP_023223985.1 | F1 capsule-anchoring protein | VF |
| LUY11_RS17655 () | 3613159..3613899 | - | 741 | WP_052939572.1 | Chaperone protein caf1M | VF |
| LUY11_RS17660 () | 3613974..3614471 | - | 498 | WP_058654878.1 | Saf-pilin pilus formation protein SafA | - |
| LUY11_RS17665 () | 3615232..3615936 | - | 705 | Protein_3459 | integrase core domain-containing protein | - |
| LUY11_RS17670 () | 3615989..3616225 | + | 237 | Protein_3460 | SymE family type I addiction module toxin | - |
| LUY11_RS17675 () | 3616370..3616648 | - | 279 | WP_012664366.1 | hypothetical protein | - |
| LUY11_RS17680 () | 3616966..3617433 | - | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| LUY11_RS17685 () | 3617526..3617801 | - | 276 | WP_223163371.1 | hypothetical protein | - |
| - | 3618717..3619049 | - | 333 | - | - | Antitoxin Detail |
| LUY11_RS17690 () | 3618874..3619131 | + | 258 | WP_023203422.1 | SymE family type I addiction module toxin | Toxin Detail |
| LUY11_RS17695 () | 3619190..3619498 | - | 309 | WP_023203423.1 | hypothetical protein | - |
| LUY11_RS17700 () | 3619517..3619924 | - | 408 | WP_024146273.1 | DUF4329 domain-containing protein | - |
| LUY11_RS17705 () | 3620285..3620806 | - | 522 | WP_023203424.1 | SMI1/KNR4 family protein | - |
| LUY11_RS17710 () | 3620820..3624953 | - | 4134 | WP_072106084.1 | RHS repeat-associated core domain-containing protein | - |
| LUY11_RS17715 () | 3624972..3625418 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| LUY11_RS17720 () | 3625442..3627631 | - | 2190 | WP_052939573.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY11_RS17725 () | 3628028..3628549 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| LUY11_RS17730 () | 3628573..3628989 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| LUY11_RS17735 () | 3629703..3630272 | + | 570 | WP_052939574.1 | DUF4291 domain-containing protein | - |
| LUY11_RS17740 () | 3630318..3630866 | - | 549 | WP_023236940.1 | hypothetical protein | - |
| LUY11_RS17745 () | 3630863..3635401 | - | 4539 | WP_223163370.1 | RHS repeat-associated core domain-containing protein | - |
| LUY11_RS17750 () | 3635432..3635863 | - | 432 | WP_001199685.1 | DcrB-related protein | - |
| LUY11_RS17755 () | 3635878..3638100 | - | 2223 | WP_052939575.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY11_RS17760 () | 3638132..3638581 | - | 450 | WP_223152164.1 | hypothetical protein | - |
| LUY11_RS17765 () | 3638595..3639296 | - | 702 | WP_023181852.1 | hypothetical protein | - |
| LUY11_RS17770 () | 3639307..3639387 | - | 81 | Protein_3480 | hypothetical protein | - |
| LUY11_RS17775 () | 3639423..3639884 | - | 462 | WP_023240609.1 | hypothetical protein | - |
| LUY11_RS17780 () | 3639869..3640339 | - | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| LUY11_RS17785 () | 3640382..3641149 | - | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| LUY11_RS17790 () | 3641149..3645042 | - | 3894 | WP_058654875.1 | hypothetical protein | VF |
| LUY11_RS17795 () | 3645076..3645507 | - | 432 | WP_077905250.1 | Shiga toxin A subunit | - |
| LUY11_RS17800 () | 3645710..3646483 | - | 774 | WP_023224022.1 | Rap1a/Tai family immunity protein | - |
| LUY11_RS17805 () | 3646488..3647792 | - | 1305 | WP_023224021.1 | Outer membrane porin F | VF |
| LUY11_RS17810 () | 3647789..3649132 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| LUY11_RS17815 () | 3649136..3649672 | - | 537 | WP_023202967.1 | hypothetical protein | VF |
| LUY11_RS17820 () | 3649739..3650223 | - | 485 | Protein_3490 | Protein hcp1 | VF |
| LUY11_RS17825 () | 3650366..3650749 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| LUY11_RS17830 () | 3650734..3651219 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| LUY11_RS17835 () | 3651262..3651456 | - | 195 | Protein_3493 | type VI secretion system lipoprotein TssJ | - |
| LUY11_RS17840 () | 3651523..3652008 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| LUY11_RS17845 () | 3652262..3652594 | - | 333 | WP_077944511.1 | hypothetical protein | - |
| LUY11_RS17850 () | 3652721..3652831 | - | 111 | WP_077684072.1 | BPSL0067 family protein | - |
| LUY11_RS17855 () | 3652894..3654402 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| LUY11_RS17860 () | 3654426..3654968 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| LUY11_RS17865 () | 3655069..3657708 | - | 2640 | WP_023223892.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|