MGE detailed information
MGE type: Prophage MGE length: 28616 bp
Accession: NZ_CP089775 Location: 3099514..3128129 Organism: Mycobacterium tuberculosis strain 02-R1708 Replicon: chromosome
Accession: NZ_CP089775 Location: 3099514..3128129 Organism: Mycobacterium tuberculosis strain 02-R1708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ70_RS14720 (LVJ70_14725) | 3096271..3096957 | + | 687 | WP_003414136.1 | manganese-binding transcriptional regulator MntR | - |
| LVJ70_RS14725 (LVJ70_14730) | 3097018..3098250 | - | 1233 | WP_003414139.1 | acyl-CoA dehydrogenase family protein | - |
| LVJ70_RS14730 (LVJ70_14735) | 3098276..3099481 | - | 1206 | WP_003414142.1 | lipid-transfer protein | - |
| LVJ70_RS14735 (LVJ70_14740) | 3099514..3100893 | - | 1380 | WP_003899482.1 | IS607 family transposase IS1602 | Transposase |
| LVJ70_RS14740 (LVJ70_14745) | 3100893..3101474 | - | 582 | WP_003414146.1 | IS607 family transposase IS1602 | Transposase |
| LVJ70_RS14745 (LVJ70_14750) | 3101676..3102572 | - | 897 | WP_003414147.1 | tRNA pseudouridine(55) synthase TruB | - |
| LVJ70_RS14750 (LVJ70_14755) | 3102569..3103252 | - | 684 | WP_003414149.1 | 4'-phosphopantetheinyl transferase | - |
| LVJ70_RS14755 (LVJ70_14760) | 3103249..3104223 | - | 975 | WP_003414151.1 | metallophosphoesterase | - |
| LVJ70_RS14760 (LVJ70_14765) | 3104368..3104931 | - | 564 | WP_003900574.1 | LppA family lipoprotein | - |
| LVJ70_RS14765 (LVJ70_14770) | 3104931..3106619 | - | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
| LVJ70_RS14770 (LVJ70_14775) | 3106623..3106949 | - | 327 | WP_003414157.1 | hypothetical protein | - |
| LVJ70_RS14775 (LVJ70_14780) | 3107122..3107709 | + | 588 | WP_003914429.1 | DUF3558 family protein | - |
| LVJ70_RS14780 (LVJ70_14785) | 3107728..3109377 | + | 1650 | WP_003900576.1 | CocE/NonD family hydrolase | - |
| LVJ70_RS14785 (LVJ70_14790) | 3109479..3109835 | - | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin Detail |
| LVJ70_RS14790 (LVJ70_14795) | 3109819..3110049 | - | 231 | WP_003901465.1 | type II toxin-antitoxin system antitoxin MazE9 | Antitoxin Detail |
| LVJ70_RS14795 (LVJ70_14800) | 3110092..3111135 | - | 1044 | WP_003414172.1 | DUF2293 domain-containing protein | - |
| LVJ70_RS14800 (LVJ70_14805) | 3111134..3111601 | + | 468 | WP_003414177.1 | DUF1778 domain-containing protein | - |
| LVJ70_RS14805 (LVJ70_14810) | 3111777..3112031 | - | 255 | WP_003917684.1 | hypothetical protein | - |
| LVJ70_RS14810 (LVJ70_14815) | 3112179..3112583 | + | 405 | WP_009938577.1 | ISNCY family transposase ISLbi1 | Transposase |
| LVJ70_RS14815 (LVJ70_14820) | 3112580..3112771 | + | 192 | WP_003414184.1 | hypothetical protein | - |
| LVJ70_RS14820 (LVJ70_14825) | 3112988..3113248 | + | 261 | Protein_2925 | ISNCY family transposase ISKol11 | Transposase |
| LVJ70_RS14825 (LVJ70_14830) | 3114358..3114615 | + | 258 | WP_003899489.1 | hypothetical protein | - |
| LVJ70_RS14830 (LVJ70_14835) | 3114720..3115031 | + | 312 | WP_003414190.1 | hypothetical protein | - |
| LVJ70_RS14835 (LVJ70_14840) | 3115053..3115289 | - | 237 | Protein_2928 | transposase | - |
| LVJ70_RS14840 (LVJ70_14845) | 3115451..3116059 | + | 609 | WP_003414195.1 | hypothetical protein | - |
| LVJ70_RS14845 (LVJ70_14850) | 3116130..3117539 | + | 1410 | WP_003414198.1 | IS481 family transposase ISGur11 | Transposase |
| LVJ70_RS14850 (LVJ70_14855) | 3117536..3118348 | + | 813 | WP_003899491.1 | hypothetical protein | VF |
| LVJ70_RS14865 (LVJ70_14870) | 3124589..3124930 | - | 342 | WP_003414276.1 | CRISPR-associated endonuclease Cas2 | - |
| LVJ70_RS14870 (LVJ70_14875) | 3124931..3125947 | - | 1017 | WP_003414279.1 | CRISPR-associated endonuclease Cas1 | - |
| LVJ70_RS14875 (LVJ70_14880) | 3125960..3126832 | - | 873 | WP_078408031.1 | type III-A CRISPR-associated CARF protein Csm6 | - |
| LVJ70_RS14880 (LVJ70_14885) | 3126868..3128129 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| LVJ70_RS14885 (LVJ70_14890) | 3128171..3129010 | - | 840 | Protein_2938 | type III-A CRISPR-associated RAMP protein Csm5 | - |
| LVJ70_RS14890 (LVJ70_14895) | 3129007..3129915 | - | 909 | WP_003414288.1 | type III-A CRISPR-associated RAMP protein Csm4 | - |
| LVJ70_RS14895 (LVJ70_14900) | 3129896..3130606 | - | 711 | WP_003414292.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| LVJ70_RS14900 (LVJ70_14905) | 3130616..3130990 | - | 375 | WP_003414296.1 | type III-A CRISPR-associated protein Csm2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|