MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92427 bp
Accession: NZ_CP089271 Location: 1..92427 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: plasmid pO157
Accession: NZ_CP089271 Location: 1..92427 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: plasmid pO157
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI72_RS28435 (1) | 1..858 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| LSI72_RS28440 (1769) | 1769..2053 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LSI72_RS28445 (2053) | 2053..2328 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSI72_RS28450 (2423) | 2423..2629 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| LSI72_RS28455 (2729) | 2729..2944 | - | 216 | Protein_5 | transposase | - |
| LSI72_RS28460 (2988) | 2988..3554 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| LSI72_RS28465 (3554) | 3554..3970 | - | 417 | Protein_7 | IS91 family transposase | - |
| LSI72_RS28470 (3970) | 3970..4155 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| LSI72_RS28475 (4332) | 4332..6542 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| LSI72_RS28480 (6586) | 6586..6975 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| LSI72_RS28485 (7032) | 7032..8020 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| LSI72_RS28490 (8201) | 8201..12103 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| LSI72_RS28495 (12359) | 12359..12840 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| LSI72_RS28500 (14282) | 14282..15103 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| LSI72_RS28505 (15103) | 15103..16209 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| LSI72_RS28510 (16299) | 16299..18020 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| LSI72_RS28515 (18094) | 18094..19092 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LSI72_RS28520 (19145) | 19145..19333 | + | 189 | Protein_18 | hypothetical protein | - |
| LSI72_RS28525 (19437) | 19437..19523 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| LSI72_RS28530 (20000) | 20000..22696 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| LSI72_RS28535 (22783) | 22783..23658 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| LSI72_RS28540 (23659) | 23659..25626 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| LSI72_RS28545 (25626) | 25626..27131 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| LSI72_RS28550 (27133) | 27133..28356 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| LSI72_RS28555 (28387) | 28387..28821 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| LSI72_RS28560 (28818) | 28818..29372 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| LSI72_RS28565 (29387) | 29387..29734 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| LSI72_RS28570 (29731) | 29731..30330 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| LSI72_RS28575 (30327) | 30327..31304 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| LSI72_RS28580 (31238) | 31238..32515 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| LSI72_RS28585 (32502) | 32502..33014 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| LSI72_RS28590 (33189) | 33189..33905 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LSI72_RS28595 (33997) | 33997..34398 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| LSI72_RS28600 (34577) | 34577..35748 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| LSI72_RS28605 (36289) | 36289..36804 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| LSI72_RS28610 (36806) | 36806..39802 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| LSI72_RS28615 (39852) | 39852..41972 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| LSI72_RS28620 (41976) | 41976..43415 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| LSI72_RS28625 (43482) | 43482..43676 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| LSI72_RS28630 (43706) | 43706..43990 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| LSI72_RS28635 (44159) | 44159..44389 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| LSI72_RS28640 (44510) | 44510..45250 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| LSI72_RS28645 (45535) | 45535..46512 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| LSI72_RS28650 (46920) | 46920..47120 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| LSI72_RS28655 (47117) | 47117..47737 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| LSI72_RS28660 (47734) | 47734..48417 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| LSI72_RS28665 (48876) | 48876..49094 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LSI72_RS28670 (49096) | 49096..49401 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LSI72_RS28675 (49402) | 49402..50208 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| LSI72_RS28685 (51863) | 51863..52123 | + | 261 | WP_071526583.1 | RepB family plasmid replication initiator protein | - |
| LSI72_RS28690 (52711) | 52711..53877 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| LSI72_RS28695 (53877) | 53877..54848 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LSI72_RS28700 (56148) | 56148..57872 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| LSI72_RS28705 (57949) | 57949..58851 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| LSI72_RS28710 (58855) | 58855..59160 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| LSI72_RS28715 (59237) | 59237..59920 | + | 684 | WP_000085945.1 | DNA methylase | - |
| LSI72_RS28720 (59921) | 59921..60142 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| LSI72_RS28725 (60036) | 60036..60590 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| LSI72_RS28730 (60636) | 60636..61412 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| LSI72_RS28735 (61830) | 61830..62255 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| LSI72_RS28740 (62302) | 62302..62724 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| LSI72_RS28745 (62721) | 62721..62912 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| LSI72_RS28750 (62882) | 62882..63391 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| LSI72_RS28755 (63908) | 63908..64138 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| LSI72_RS28760 (64190) | 64190..65549 | + | 1360 | Protein_66 | DUF3560 domain-containing protein | - |
| LSI72_RS28765 (65625) | 65625..66155 | + | 531 | WP_001684201.1 | class I SAM-dependent methyltransferase | - |
| LSI72_RS28770 (66241) | 66241..66702 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| LSI72_RS28775 (67003) | 67003..67454 | + | 452 | Protein_69 | single-stranded DNA-binding protein | - |
| LSI72_RS28780 (67511) | 67511..67744 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| LSI72_RS28785 (67810) | 67810..69768 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| LSI72_RS28790 (69823) | 69823..70257 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| LSI72_RS28795 (70254) | 70254..71015 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (70984) | 70984..71182 | + | 199 | NuclAT_0 | - | - |
| - (70984) | 70984..71182 | + | 199 | NuclAT_0 | - | - |
| - (70984) | 70984..71182 | + | 199 | NuclAT_0 | - | - |
| - (70984) | 70984..71182 | + | 199 | NuclAT_0 | - | - |
| LSI72_RS28800 (71189) | 71189..71338 | + | 150 | Protein_74 | FlmC family protein | - |
| LSI72_RS28805 (71289) | 71289..71405 | + | 117 | WP_001375150.1 | type I toxin-antitoxin system Hok family toxin | - |
| LSI72_RS28810 (71539) | 71539..73560 | + | 2022 | Protein_76 | hypothetical protein | Relaxase |
| LSI72_RS28815 (73628) | 73628..74059 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| LSI72_RS28820 (74731) | 74731..75080 | - | 350 | Protein_78 | IS3 family transposase IS3H | Transposase |
| LSI72_RS28825 (75174) | 75174..75437 | + | 264 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| LSI72_RS28830 (75477) | 75477..75597 | + | 121 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| LSI72_RS28835 (75594) | 75594..75746 | + | 153 | Protein_81 | IS1 family transposase | - |
| LSI72_RS28840 (75853) | 75853..85362 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| LSI72_RS28845 (85436) | 85436..85660 | + | 225 | Protein_83 | IS3 family transposase IS3H | Transposase |
| LSI72_RS28850 (85653) | 85653..85898 | - | 246 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| LSI72_RS28855 (85905) | 85905..86156 | - | 252 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| LSI72_RS28860 (86213) | 86213..87601 | + | 1389 | Protein_86 | Multifunctional conjugation protein TraI | Relaxase |
| LSI72_RS28865 (87621) | 87621..88367 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| LSI72_RS28870 (88426) | 88426..89286 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| LSI72_RS28875 (89389) | 89389..89949 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| LSI72_RS28880 (90082) | 90082..90294 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| LSI72_RS28885 (90539) | 90539..91000 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| LSI72_RS28890 (91046) | 91046..91255 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| LSI72_RS28895 (91293) | 91293..91631 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| LSI72_RS28900 (91871) | 91871..92125 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|