MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33309 bp
Accession: NZ_CP089138 Location: 1..33309 Organism: Escherichia coli strain XD35 Replicon: plasmid pXD35005
Accession: NZ_CP089138 Location: 1..33309 Organism: Escherichia coli strain XD35 Replicon: plasmid pXD35005
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0768_RS03095 (LS330_03095) | 5..304 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| K0768_RS03100 (LS330_03100) | 395..745 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| K0768_RS03105 (LS330_03105) | 1050..1298 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| K0768_RS03110 (LS330_03110) | 1295..1642 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| K0768_RS03115 (LS330_03115) | 2003..2506 | + | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| K0768_RS03120 (LS330_03120) | 2510..3739 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| K0768_RS03125 (LS330_03125) | 3816..4109 | + | 294 | WP_060598542.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| K0768_RS03130 (LS330_03130) | 4106..4321 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| K0768_RS03135 (LS330_03135) | 4677..5297 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| K0768_RS03140 (LS330_03140) | 5311..5637 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| K0768_RS03145 (LS330_03145) | 5656..8403 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| K0768_RS03150 (LS330_03150) | 8415..9131 | + | 717 | WP_000832283.1 | type IV secretion system protein | - |
| K0768_RS03155 (LS330_03155) | 9143..10237 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| K0768_RS03160 (LS330_03160) | 10752..11438 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| K0768_RS03165 (LS330_03165) | 11438..12343 | + | 906 | WP_000732356.1 | Type IV secretion system protein virB9 | VF |
| K0768_RS03170 (LS330_03170) | 12336..13454 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| K0768_RS03175 (LS330_03175) | 13456..14484 | + | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| K0768_RS03180 (LS330_03180) | 14471..16333 | + | 1863 | WP_170324155.1 | relaxosome-coupling protein TaxB | - |
| K0768_RS03185 (LS330_03185) | 16345..16764 | + | 420 | WP_000737411.1 | cag pathogenicity island Cag12 family protein | - |
| K0768_RS03190 (LS330_03190) | 16748..17053 | + | 306 | WP_001350475.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| K0768_RS03195 (LS330_03195) | 17166..17360 | + | 195 | Protein_20 | ATP-binding protein | - |
| K0768_RS03200 (LS330_03200) | 17364..17936 | + | 573 | WP_001198960.1 | hypothetical protein | - |
| K0768_RS03205 (LS330_03205) | 17941..20094 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| K0768_RS03210 (LS330_03210) | 20091..20297 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| K0768_RS03215 (LS330_03215) | 20315..20779 | + | 465 | WP_001293134.1 | H-NS family nucleoid-associated regulatory protein | - |
| K0768_RS03220 (LS330_03220) | 20866..21570 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K0768_RS03225 (LS330_03225) | 23111..23758 | + | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| K0768_RS03230 (LS330_03230) | 23833..24102 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| K0768_RS03235 (LS330_03235) | 24263..24892 | + | 630 | WP_223424520.1 | DUF2806 domain-containing protein | - |
| K0768_RS03240 (LS330_03240) | 25066..26691 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| K0768_RS03245 (LS330_03245) | 26763..27485 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| K0768_RS03250 (LS330_03250) | 27876..28403 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| K0768_RS03255 (LS330_03255) | 28538..28942 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| K0768_RS03260 (LS330_03260) | 28955..29737 | - | 783 | WP_000729201.1 | replication initiation protein | - |
| K0768_RS03265 (LS330_03265) | 31236..31751 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| K0768_RS03270 (LS330_03270) | 31856..32398 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| K0768_RS03275 (LS330_03275) | 32395..32646 | + | 252 | WP_001230707.1 | hypothetical protein | - |
| K0768_RS03280 (LS330_03280) | 32633..32860 | + | 228 | WP_000801440.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|