MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92432 bp
Accession: NZ_CP089035 Location: 1..92432 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: plasmid pO157
Accession: NZ_CP089035 Location: 1..92432 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: plasmid pO157
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI70_RS28430 (1) | 1..858 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| LSI70_RS28435 (1769) | 1769..2053 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LSI70_RS28440 (2053) | 2053..2328 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSI70_RS28445 (2423) | 2423..2629 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| LSI70_RS28450 (2729) | 2729..2944 | - | 216 | Protein_5 | transposase | - |
| LSI70_RS28455 (2988) | 2988..3554 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| LSI70_RS28460 (3554) | 3554..3970 | - | 417 | Protein_7 | IS91 family transposase | - |
| LSI70_RS28465 (3970) | 3970..4155 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| LSI70_RS28470 (4332) | 4332..6542 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| LSI70_RS28475 (6586) | 6586..6975 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| LSI70_RS28480 (7032) | 7032..8020 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| LSI70_RS28485 (8201) | 8201..12103 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| LSI70_RS28490 (12359) | 12359..12840 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| LSI70_RS28495 (14282) | 14282..15103 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| LSI70_RS28500 (15103) | 15103..16209 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| LSI70_RS28505 (16299) | 16299..18020 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| LSI70_RS28510 (18094) | 18094..19092 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LSI70_RS28515 (19145) | 19145..19333 | + | 189 | Protein_18 | hypothetical protein | - |
| LSI70_RS28520 (19437) | 19437..19523 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| LSI70_RS28525 (20002) | 20002..22698 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| LSI70_RS28530 (22785) | 22785..23660 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| LSI70_RS28535 (23661) | 23661..25628 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| LSI70_RS28540 (25628) | 25628..27133 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| LSI70_RS28545 (27135) | 27135..28358 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| LSI70_RS28550 (28389) | 28389..28823 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| LSI70_RS28555 (28820) | 28820..29374 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| LSI70_RS28560 (29389) | 29389..29736 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| LSI70_RS28565 (29733) | 29733..30332 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| LSI70_RS28570 (30329) | 30329..31306 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| LSI70_RS28575 (31240) | 31240..32517 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| LSI70_RS28580 (32504) | 32504..33016 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| LSI70_RS28585 (33191) | 33191..33907 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LSI70_RS28590 (33999) | 33999..34400 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| LSI70_RS28595 (34579) | 34579..35750 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| LSI70_RS28600 (36291) | 36291..36806 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| LSI70_RS28605 (36808) | 36808..39804 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| LSI70_RS28610 (39854) | 39854..41974 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| LSI70_RS28615 (41978) | 41978..43417 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| LSI70_RS28620 (43484) | 43484..43678 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| LSI70_RS28625 (43708) | 43708..43992 | + | 285 | WP_001358890.1 | Transcriptional repressor MprA | VF |
| LSI70_RS28630 (44161) | 44161..44391 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| LSI70_RS28635 (44512) | 44512..45252 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| LSI70_RS28640 (45537) | 45537..46514 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| LSI70_RS28645 (46922) | 46922..47122 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| LSI70_RS28650 (47119) | 47119..47739 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| LSI70_RS28655 (47736) | 47736..48419 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| LSI70_RS28660 (48878) | 48878..49096 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LSI70_RS28665 (49098) | 49098..49403 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LSI70_RS28670 (49404) | 49404..50210 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| LSI70_RS28680 (51865) | 51865..52125 | + | 261 | WP_071526583.1 | RepB family plasmid replication initiator protein | - |
| LSI70_RS28685 (52713) | 52713..53879 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| LSI70_RS28690 (53879) | 53879..54850 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LSI70_RS28695 (56150) | 56150..57874 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| LSI70_RS28700 (57951) | 57951..58853 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| LSI70_RS28705 (58857) | 58857..59160 | + | 304 | Protein_56 | hypothetical protein | - |
| LSI70_RS28710 (59237) | 59237..59915 | + | 679 | Protein_57 | DNA methylase | - |
| LSI70_RS28715 (59916) | 59916..60137 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| LSI70_RS28720 (60031) | 60031..60585 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| LSI70_RS28725 (60631) | 60631..61408 | + | 778 | Protein_60 | hypothetical protein | - |
| LSI70_RS28730 (61828) | 61828..62253 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| LSI70_RS28735 (62300) | 62300..62723 | + | 424 | Protein_62 | DUF1380 family protein | - |
| LSI70_RS28740 (62720) | 62720..62911 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| LSI70_RS28745 (62881) | 62881..63390 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| LSI70_RS28750 (63907) | 63907..64137 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| LSI70_RS28755 (64188) | 64188..65548 | + | 1361 | Protein_66 | DUF3560 domain-containing protein | - |
| LSI70_RS28760 (65595) | 65595..66158 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| LSI70_RS28765 (66244) | 66244..66705 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| LSI70_RS28770 (66775) | 66775..66981 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| LSI70_RS28775 (67007) | 67007..67459 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| LSI70_RS28780 (67516) | 67516..67749 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| LSI70_RS28785 (67815) | 67815..69773 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| LSI70_RS28790 (69828) | 69828..70262 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| LSI70_RS28795 (70259) | 70259..71020 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (70989) | 70989..71187 | + | 199 | NuclAT_0 | - | - |
| - (70989) | 70989..71187 | + | 199 | NuclAT_0 | - | - |
| - (70989) | 70989..71187 | + | 199 | NuclAT_0 | - | - |
| - (70989) | 70989..71187 | + | 199 | NuclAT_0 | - | - |
| LSI70_RS28800 (71194) | 71194..71343 | + | 150 | Protein_75 | DUF5431 family protein | - |
| LSI70_RS28805 (71285) | 71285..71410 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| LSI70_RS28810 (71544) | 71544..73565 | + | 2022 | Protein_77 | hypothetical protein | Relaxase |
| LSI70_RS28815 (73633) | 73633..74064 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| LSI70_RS28820 (74736) | 74736..75085 | - | 350 | Protein_79 | IS3 family transposase IS3H | Transposase |
| LSI70_RS28825 (75179) | 75179..75442 | + | 264 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| LSI70_RS28830 (75482) | 75482..75602 | + | 121 | Protein_81 | IS21 family transposase ISEc62 | Transposase |
| LSI70_RS28835 (75599) | 75599..75751 | + | 153 | Protein_82 | IS1 family transposase | - |
| LSI70_RS28840 (75858) | 75858..85367 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| LSI70_RS28845 (85441) | 85441..85665 | + | 225 | Protein_84 | IS3 family transposase IS3H | Transposase |
| LSI70_RS28850 (85658) | 85658..85903 | - | 246 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| LSI70_RS28855 (85910) | 85910..86161 | - | 252 | Protein_86 | IS3 family transposase IS1203 | Transposase |
| LSI70_RS28860 (86218) | 86218..87606 | + | 1389 | Protein_87 | Multifunctional conjugation protein TraI | Relaxase |
| LSI70_RS28865 (87626) | 87626..88372 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| LSI70_RS28870 (88431) | 88431..89291 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| LSI70_RS28875 (89394) | 89394..89954 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| LSI70_RS28880 (90087) | 90087..90299 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| LSI70_RS28885 (90544) | 90544..91005 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| LSI70_RS28890 (91051) | 91051..91260 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| LSI70_RS28895 (91298) | 91298..91636 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| LSI70_RS28900 (91876) | 91876..92130 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|