MGE detailed information
MGE type: Prophage MGE length: 44087 bp
Accession: NZ_CP089032 Location: 4580386..4624472 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Accession: NZ_CP089032 Location: 4580386..4624472 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI69_RS23500 (4576678) | 4576678..4577634 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
| LSI69_RS23505 (4577813) | 4577813..4578940 | - | 1128 | WP_000171064.1 | MFS transporter | - |
| LSI69_RS23510 (4579082) | 4579082..4580140 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| LSI69_RS23515 (4580386) | 4580386..4581288 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator ArgP | VF |
| LSI69_RS23520 (4581991) | 4581991..4582269 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| LSI69_RS23525 (4582436) | 4582436..4583158 | - | 723 | WP_000361969.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| LSI69_RS23530 (4583257) | 4583257..4584156 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator ArgP | VF |
| LSI69_RS23535 (4584832) | 4584832..4585788 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| LSI69_RS23540 (4585921) | 4585921..4588254 | - | 2334 | WP_000016225.1 | primase-like DNA-binding domain-containing protein | - |
| LSI69_RS23545 (4588268) | 4588268..4588591 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| LSI69_RS23550 (4588591) | 4588591..4588812 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| LSI69_RS23555 (4588809) | 4588809..4589366 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| LSI69_RS23560 (4589363) | 4589363..4589623 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| LSI69_RS23565 (4590557) | 4590557..4591309 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| LSI69_RS23570 (4591306) | 4591306..4591857 | + | 552 | WP_000968317.1 | phage polarity suppression protein | - |
| LSI69_RS23575 (4591863) | 4591863..4592135 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| LSI69_RS23580 (4592545) | 4592545..4593111 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| LSI69_RS23585 (4593111) | 4593111..4593701 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| LSI69_RS23590 (4593982) | 4593982..4595195 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| LSI69_RS23595 (4595198) | 4595198..4595677 | - | 480 | WP_000999328.1 | ATP-binding protein | - |
| LSI69_RS23600 (4595670) | 4595670..4596128 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| LSI69_RS23605 (4596128) | 4596128..4596745 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| LSI69_RS23610 (4596718) | 4596718..4597134 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| LSI69_RS23615 (4597138) | 4597138..4598319 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| LSI69_RS23620 (4598806) | 4598806..4599240 | + | 435 | Protein_4640 | IS3 family transposase ISEc48 | Transposase |
| LSI69_RS23625 (4599282) | 4599282..4600025 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| LSI69_RS23630 (4600849) | 4600849..4601622 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| LSI69_RS23635 (4601680) | 4601680..4602234 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LSI69_RS23640 (4602264) | 4602264..4602674 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| LSI69_RS23645 (4602695) | 4602695..4603138 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| LSI69_RS23650 (4603110) | 4603110..4603703 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| LSI69_RS23655 (4603703) | 4603703..4604497 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| LSI69_RS23660 (4604497) | 4604497..4604745 | - | 249 | Protein_4648 | phage replication protein | - |
| LSI69_RS23665 (4604805) | 4604805..4605727 | - | 923 | Protein_4649 | replication protein | - |
| LSI69_RS23670 (4605760) | 4605760..4606053 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| LSI69_RS23675 (4606172) | 4606172..4606372 | - | 201 | WP_000437875.1 | Cro/CI family transcriptional regulator | - |
| LSI69_RS23680 (4606473) | 4606473..4607186 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| LSI69_RS23685 (4607314) | 4607314..4607703 | + | 390 | WP_000708838.1 | hypothetical protein | - |
| LSI69_RS23690 (4607943) | 4607943..4608188 | + | 246 | WP_001303805.1 | antitermination protein N | - |
| LSI69_RS23695 (4608133) | 4608133..4609053 | + | 921 | Protein_4655 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LSI69_RS23705 (4609258) | 4609258..4610511 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LSI69_RS23710 (4610523) | 4610523..4611626 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LSI69_RS23715 (4611914) | 4611914..4612969 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LSI69_RS23720 (4613008) | 4613008..4613409 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| - (4614127) | 4614127..4614207 | - | 81 | NuclAT_12 | - | - |
| - (4614127) | 4614127..4614207 | - | 81 | NuclAT_12 | - | - |
| - (4614127) | 4614127..4614207 | - | 81 | NuclAT_12 | - | - |
| - (4614127) | 4614127..4614207 | - | 81 | NuclAT_12 | - | - |
| LSI69_RS23725 (4613467) | 4613467..4614711 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| LSI69_RS23730 (4614803) | 4614803..4615261 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LSI69_RS23735 (4615522) | 4615522..4616979 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LSI69_RS23740 (4617036) | 4617036..4617557 | - | 522 | Protein_4663 | peptide chain release factor H | - |
| LSI69_RS23745 (4617556) | 4617556..4617759 | - | 204 | Protein_4664 | RtcB family protein | - |
| LSI69_RS23750 (4618078) | 4618078..4618530 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| LSI69_RS23755 (4618540) | 4618540..4618938 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LSI69_RS23760 (4618941) | 4618941..4619234 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LSI69_RS23765 (4619286) | 4619286..4620341 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| LSI69_RS23770 (4620412) | 4620412..4621197 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| LSI69_RS23775 (4621169) | 4621169..4622881 | + | 1713 | Protein_4670 | hypothetical protein | VF |
| LSI69_RS23780 (4623026) | 4623026..4623523 | - | 498 | Protein_4671 | REP-associated tyrosine transposase RayT | - |
| LSI69_RS23785 (4623699) | 4623699..4624472 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| LSI69_RS23790 (4624658) | 4624658..4624918 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| LSI69_RS23795 (4624921) | 4624921..4625197 | + | 277 | Protein_4674 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| LSI69_RS23800 (4625353) | 4625353..4626093 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LSI69_RS23805 (4626064) | 4626064..4626831 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| LSI69_RS23810 (4626936) | 4626936..4627514 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|