MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 29819 bp
Accession: NZ_CP087968 Location: 2901143..2930961 Organism: Nocardioides sp. B-3 Replicon: chromosome
Accession: NZ_CP087968 Location: 2901143..2930961 Organism: Nocardioides sp. B-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP418_RS19275 (LP418_18295) | 2896544..2897593 | + | 1050 | WP_257953279.1 | hypothetical protein | - |
| LP418_RS19280 | 2897900..2898070 | + | 171 | WP_257957103.1 | hypothetical protein | - |
| LP418_RS19285 (LP418_18305) | 2898155..2899120 | + | 966 | Protein_3825 | UPF0182 family protein | - |
| LP418_RS19290 (LP418_18310) | 2899185..2899787 | + | 603 | WP_257953280.1 | UPF0182 family protein | - |
| LP418_RS19295 | 2899679..2900077 | + | 399 | Protein_3827 | UPF0182 family protein | - |
| LP418_RS19300 (LP418_18315) | 2900075..2900995 | + | 921 | WP_257957104.1 | UPF0182 family protein | - |
| LP418_RS19310 (LP418_18325) | 2901361..2901591 | + | 231 | WP_257953281.1 | helix-turn-helix domain-containing protein | - |
| LP418_RS19315 (LP418_18330) | 2901598..2902410 | + | 813 | WP_257953282.1 | N-terminal phage integrase SAM-like domain-containing protein | - |
| LP418_RS19320 | 2902296..2902589 | + | 294 | WP_257957105.1 | hypothetical protein | - |
| LP418_RS19325 | 2902630..2902794 | + | 165 | WP_257953283.1 | hypothetical protein | - |
| LP418_RS19330 (LP418_18340) | 2902791..2903219 | + | 429 | WP_257953284.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LP418_RS19335 (LP418_18345) | 2903221..2903526 | + | 306 | WP_257953285.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LP418_RS19340 (LP418_18350) | 2903784..2904455 | + | 672 | Protein_3835 | MobF family relaxase | - |
| LP418_RS19345 | 2904541..2904807 | + | 267 | WP_257957106.1 | relaxase domain-containing protein | - |
| LP418_RS19350 (LP418_18355) | 2904859..2906592 | + | 1734 | WP_257953286.1 | AAA family ATPase | - |
| LP418_RS19355 (LP418_18360) | 2907885..2908730 | - | 846 | WP_257957276.1 | hypothetical protein | - |
| LP418_RS19360 (LP418_18365) | 2908927..2909706 | - | 780 | Protein_3839 | 4-hydroxy-2-oxovalerate aldolase | - |
| LP418_RS19365 (LP418_18370) | 2909757..2910698 | - | 942 | WP_257953287.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LP418_RS19370 (LP418_18375) | 2910698..2911432 | - | 735 | WP_272496282.1 | fumarylacetoacetate hydrolase family protein | - |
| LP418_RS19375 (LP418_18380) | 2911497..2912132 | - | 636 | WP_257953288.1 | amidohydrolase | - |
| LP418_RS19380 (LP418_18385) | 2912598..2913032 | - | 435 | WP_257953289.1 | amidohydrolase | - |
| LP418_RS19385 (LP418_18390) | 2912920..2913591 | - | 672 | WP_257953290.1 | amidohydrolase | - |
| LP418_RS19390 | 2913591..2914508 | - | 918 | WP_257953291.1 | FAD-dependent monooxygenase | - |
| LP418_RS19395 | 2914496..2915164 | - | 669 | WP_257953292.1 | FAD-dependent monooxygenase | - |
| LP418_RS19400 (LP418_18400) | 2915298..2916302 | - | 1005 | WP_257953293.1 | VOC family protein | - |
| LP418_RS19405 (LP418_18405) | 2916309..2917178 | - | 870 | WP_257953294.1 | alpha/beta fold hydrolase | - |
| LP418_RS19410 (LP418_18410) | 2917363..2917896 | + | 534 | WP_257953295.1 | TetR/AcrR family transcriptional regulator | - |
| LP418_RS19415 (LP418_18415) | 2918402..2918629 | + | 228 | WP_257953296.1 | helix-turn-helix domain-containing protein | - |
| LP418_RS19420 (LP418_18420) | 2918871..2919185 | + | 315 | WP_257957107.1 | N-terminal phage integrase SAM-like domain-containing protein | - |
| LP418_RS19425 (LP418_18425) | 2919490..2919828 | + | 339 | WP_257953297.1 | tyrosine-type recombinase/integrase | - |
| LP418_RS19430 (LP418_18430) | 2919839..2920486 | - | 648 | WP_257953298.1 | Fic family protein | - |
| LP418_RS19435 | 2920987..2921190 | + | 204 | WP_257953299.1 | relaxase domain-containing protein | - |
| LP418_RS19440 (LP418_18435) | 2921153..2922130 | + | 978 | WP_257953300.1 | MobF family relaxase | - |
| LP418_RS19445 (LP418_18440) | 2922033..2923565 | + | 1533 | WP_257953301.1 | AAA family ATPase | - |
| LP418_RS19450 (LP418_18445) | 2924078..2924425 | + | 348 | WP_257953302.1 | hypothetical protein | - |
| LP418_RS19455 (LP418_18450) | 2925863..2926960 | + | 1098 | WP_257953303.1 | hypothetical protein | - |
| LP418_RS19460 (LP418_18455) | 2926971..2927585 | + | 615 | WP_257953304.1 | hypothetical protein | - |
| LP418_RS19465 (LP418_18460) | 2928061..2929695 | - | 1635 | Protein_3860 | IS1634 family transposase | - |
| LP418_RS19470 (LP418_18465) | 2930388..2930539 | + | 152 | Protein_3861 | IS1380 family transposase | - |
| LP418_RS19475 (LP418_18470) | 2930609..2930764 | + | 156 | WP_257957108.1 | hypothetical protein | - |
| LP418_RS19480 (LP418_18475) | 2931113..2931424 | - | 312 | WP_257953305.1 | rhodanese-like domain-containing protein | - |
| LP418_RS19485 (LP418_18480) | 2931456..2931827 | - | 372 | WP_257953306.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LP418_RS19490 (LP418_18485) | 2932040..2932438 | + | 399 | WP_257953307.1 | hypothetical protein | - |
| LP418_RS19495 (LP418_18490) | 2932546..2932740 | + | 195 | WP_257953308.1 | hypothetical protein | - |
| LP418_RS19500 (LP418_18495) | 2932959..2933786 | + | 828 | WP_257953309.1 | rhodanese-like domain-containing protein | - |
| LP418_RS19505 (LP418_18500) | 2933925..2934428 | + | 504 | WP_257953310.1 | MFS transporter | - |
| LP418_RS19510 (LP418_18505) | 2934370..2935029 | + | 660 | WP_257953311.1 | MFS transporter | - |
| LP418_RS19515 (LP418_18510) | 2935091..2935942 | - | 852 | WP_257953312.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|