MGE detailed information
MGE type: Prophage MGE length: 19386 bp
Accession: NZ_CP087686 Location: 926..20311 Organism: Xylella taiwanensis strain PLS19A Replicon: chromosome
Accession: NZ_CP087686 Location: 926..20311 Organism: Xylella taiwanensis strain PLS19A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH61_RS00005 (LPH61_00005) | 305..577 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| LPH61_RS00010 (LPH61_00010) | 577..837 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LPH61_RS00015 (LPH61_00015) | 926..2053 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH61_RS00020 (LPH61_00020) | 2066..2410 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH61_RS00025 (LPH61_00025) | 2413..3798 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH61_RS00030 (LPH61_00030) | 3978..4214 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH61_RS00035 (LPH61_00035) | 4223..4429 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH61_RS00040 (LPH61_00040) | 4432..4746 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH61_RS00045 (LPH61_00045) | 5022..5609 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH61_RS00050 (LPH61_00050) | 5806..5949 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH61_RS00055 (LPH61_00055) | 6069..6269 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH61_RS00060 (LPH61_00060) | 6318..6581 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH61_RS00065 (LPH61_00065) | 6585..6746 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH61_RS00070 (LPH61_00070) | 7036..7365 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH61_RS00075 (LPH61_00075) | 7454..7954 | - | 501 | Protein_14 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH61_RS00080 (LPH61_00080) | 8402..8623 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH61_RS00085 (LPH61_00085) | 8620..8943 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH61_RS00090 (LPH61_00090) | 9044..10192 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH61_RS00095 (LPH61_00095) | 10192..10533 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH61_RS00100 (LPH61_00100) | 10537..11604 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH61_RS00105 (LPH61_00105) | 12072..12290 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH61_RS00110 (LPH61_00110) | 12299..12508 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH61_RS00115 (LPH61_00115) | 12508..12801 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH61_RS00120 (LPH61_00120) | 12847..13995 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH61_RS00125 (LPH61_00125) | 14426..14608 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH61_RS00130 (LPH61_00130) | 14639..14863 | - | 225 | WP_160199341.1 | hypothetical protein | - |
| LPH61_RS00140 (LPH61_00140) | 15510..16178 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH61_RS00145 (LPH61_00145) | 17033..18802 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH61_RS00150 (LPH61_00150) | 19124..19951 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH61_RS00155 (LPH61_00155) | 20096..20388 | + | 293 | Protein_29 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LPH61_RS00160 (LPH61_00160) | 20415..21594 | + | 1180 | Protein_30 | Tn3 family transposase | - |
| LPH61_RS00165 (LPH61_00165) | 21638..23155 | - | 1518 | WP_038271625.1 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|