MGE detailed information
MGE type: Prophage MGE length: 13727 bp
Accession: NZ_CP087678 Location: 6417..20143 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Accession: NZ_CP087678 Location: 6417..20143 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH42_RS00020 (LPH42_00020) | 1898..2242 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH42_RS00025 (LPH42_00025) | 2245..3630 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH42_RS00030 (LPH42_00030) | 3810..4046 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH42_RS00035 (LPH42_00035) | 4055..4261 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH42_RS00040 (LPH42_00040) | 4264..4578 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH42_RS00045 (LPH42_00045) | 4854..5441 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH42_RS00050 (LPH42_00050) | 5638..5781 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH42_RS00055 (LPH42_00055) | 5901..6101 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH42_RS00060 (LPH42_00060) | 6150..6413 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH42_RS00065 (LPH42_00065) | 6417..6578 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH42_RS00070 (LPH42_00070) | 6868..7197 | + | 330 | WP_230428286.1 | hypothetical protein ; Integrase | Integrase |
| LPH42_RS00075 (LPH42_00075) | 7286..7786 | - | 501 | Protein_14 | hypothetical protein ; Integrase | Integrase |
| LPH42_RS00080 (LPH42_00080) | 8234..8455 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH42_RS00085 (LPH42_00085) | 8452..8775 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH42_RS00090 (LPH42_00090) | 8876..10024 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH42_RS00095 (LPH42_00095) | 10024..10365 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH42_RS00100 (LPH42_00100) | 10369..11436 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH42_RS00105 (LPH42_00105) | 11904..12122 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH42_RS00110 (LPH42_00110) | 12131..12340 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH42_RS00115 (LPH42_00115) | 12340..12633 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH42_RS00120 (LPH42_00120) | 12679..13827 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH42_RS00125 (LPH42_00125) | 14258..14440 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH42_RS00130 (LPH42_00130) | 14471..14731 | - | 261 | WP_152536640.1 | hypothetical protein | - |
| LPH42_RS00140 (LPH42_00140) | 15342..16010 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH42_RS00145 (LPH42_00145) | 16865..18634 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH42_RS00150 (LPH42_00150) | 18956..19783 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH42_RS00155 (LPH42_00155) | 19928..20220 | + | 293 | Protein_29 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| LPH42_RS00160 (LPH42_00160) | 20247..21426 | + | 1180 | Protein_30 | Tn3 family transposase | - |
| LPH42_RS00165 (LPH42_00165) | 21470..22987 | - | 1518 | WP_038271625.1 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|