MGE detailed information
MGE type: Prophage MGE length: 16254 bp
Accession: NZ_CP087677 Location: 30779..47032 Organism: Xylella taiwanensis strain PLS15A Replicon: chromosome
Accession: NZ_CP087677 Location: 30779..47032 Organism: Xylella taiwanensis strain PLS15A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH39_RS00135 (LPH39_00135) | 27787..29862 | + | 2076 | WP_230428285.1 | S46 family peptidase | - |
| LPH39_RS00140 (LPH39_00140) | 29969..30613 | + | 645 | WP_038272466.1 | histidine phosphatase family protein | - |
| LPH39_RS00145 (LPH39_00145) | 30779..31123 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH39_RS00150 (LPH39_00150) | 31159..31431 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH39_RS00155 (LPH39_00155) | 31431..31691 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH39_RS00160 (LPH39_00160) | 31780..32907 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH39_RS00165 (LPH39_00165) | 32920..33264 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH39_RS00170 (LPH39_00170) | 33267..34652 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH39_RS00175 (LPH39_00175) | 34832..35068 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH39_RS00180 (LPH39_00180) | 35077..35283 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH39_RS00185 (LPH39_00185) | 35286..35600 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH39_RS00190 (LPH39_00190) | 35876..36463 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH39_RS00195 (LPH39_00195) | 36660..36803 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH39_RS00200 (LPH39_00200) | 36923..37123 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH39_RS00205 (LPH39_00205) | 37172..37435 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH39_RS00210 (LPH39_00210) | 37439..37600 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH39_RS00215 (LPH39_00215) | 37890..38219 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH39_RS00220 (LPH39_00220) | 38308..38808 | - | 501 | Protein_43 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH39_RS00225 (LPH39_00225) | 39256..39477 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH39_RS00230 (LPH39_00230) | 39474..39797 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH39_RS00235 (LPH39_00235) | 39898..41046 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH39_RS00240 (LPH39_00240) | 41046..41387 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH39_RS00245 (LPH39_00245) | 41391..42458 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH39_RS00250 (LPH39_00250) | 42926..43144 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH39_RS00255 (LPH39_00255) | 43153..43362 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH39_RS00260 (LPH39_00260) | 43362..43655 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH39_RS00265 (LPH39_00265) | 43701..44849 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH39_RS00270 (LPH39_00270) | 45280..45462 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH39_RS00275 (LPH39_00275) | 45493..45717 | - | 225 | WP_160199341.1 | hypothetical protein | - |
| LPH39_RS00285 (LPH39_00285) | 46364..47032 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH39_RS00290 (LPH39_00290) | 47887..49656 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH39_RS00295 (LPH39_00295) | 49978..50805 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH39_RS00300 (LPH39_00300) | 50950..51242 | + | 293 | Protein_58 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|