MGE detailed information
MGE type: Conjugative plasmid MGE length: 153633 bp
Accession: NZ_CP087671 Location: 1..153633 Organism: Klebsiella pneumoniae strain KP53 Replicon: plasmid P2-NDM-1
Accession: NZ_CP087671 Location: 1..153633 Organism: Klebsiella pneumoniae strain KP53 Replicon: plasmid P2-NDM-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOM31_RS27605 | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| LOM31_RS27610 | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| LOM31_RS27615 | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LOM31_RS27620 | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| LOM31_RS27625 | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| LOM31_RS27630 | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| LOM31_RS27635 | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| LOM31_RS27640 | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| LOM31_RS27645 | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| LOM31_RS27650 | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| LOM31_RS27655 | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| LOM31_RS27660 | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| LOM31_RS27665 | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| LOM31_RS27670 | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| LOM31_RS27675 | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| LOM31_RS27680 | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| LOM31_RS27685 | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| LOM31_RS27690 | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| LOM31_RS27695 | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| LOM31_RS27700 | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| LOM31_RS27705 | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LOM31_RS27710 | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOM31_RS27715 | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| LOM31_RS27720 | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| LOM31_RS27725 | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| LOM31_RS27730 | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| LOM31_RS27735 | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| LOM31_RS27740 | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| LOM31_RS27745 | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| LOM31_RS27750 | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LOM31_RS27755 | 19197..20210 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LOM31_RS27760 | 20502..21056 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LOM31_RS27765 | 21153..21605 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LOM31_RS27770 | 21738..22211 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| LOM31_RS27775 | 22392..23237 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| LOM31_RS27780 | 23354..23701 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LOM31_RS27785 | 23695..24534 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LOM31_RS27790 | 24939..26480 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LOM31_RS27795 | 26715..27152 | - | 438 | Protein_39 | N-(5'-phosphoribosyl)anthranilate isomerase | - |
| LOM31_RS27800 | 27157..27522 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| LOM31_RS27805 | 27526..28338 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| LOM31_RS29010 | 28439..28582 | - | 144 | Protein_42 | IS30 family transposase | - |
| LOM31_RS27810 | 28581..28994 | + | 414 | Protein_43 | Chloramphenicol acetyltransferase | VF |
| LOM31_RS27815 | 29079..29531 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LOM31_RS27820 | 29754..30101 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LOM31_RS27825 | 30095..30934 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LOM31_RS27830 | 31062..31265 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| LOM31_RS27835 | 31421..32626 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| LOM31_RS27840 | 32637..32942 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| LOM31_RS27845 | 32986..33051 | + | 66 | Protein_50 | EAL domain-containing protein | - |
| LOM31_RS27850 | 33169..33933 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LOM31_RS27855 | 34426..35010 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LOM31_RS27860 | 35010..36248 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LOM31_RS27865 | 36245..37150 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LOM31_RS27870 | 37272..37976 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LOM31_RS27875 | 38209..39069 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| LOM31_RS27880 | 39082..39375 | + | 294 | Protein_57 | tunicamycin resistance protein | - |
| LOM31_RS27885 | 39438..40142 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LOM31_RS27890 | 40148..40288 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| LOM31_RS27895 | 40774..41511 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LOM31_RS27900 | 41508..41732 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| LOM31_RS27905 | 41943..43436 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| LOM31_RS27910 | 43467..44351 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| LOM31_RS27915 | 44568..45782 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| LOM31_RS27920 | 45810..46115 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LOM31_RS27925 | 46227..46415 | + | 189 | Protein_66 | IS91 family transposase | - |
| LOM31_RS27930 | 46382..47581 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| LOM31_RS27935 | 47687..48337 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LOM31_RS27940 | 48369..48611 | - | 243 | WP_000844627.1 | transposase | - |
| LOM31_RS27945 | 48669..48923 | - | 255 | Protein_70 | Tn3 family transposase | - |
| LOM31_RS27950 | 48988..49692 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LOM31_RS27955 | 49753..50589 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LOM31_RS27960 | 50589..51392 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LOM31_RS27965 | 51453..52268 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LOM31_RS27970 | 52575..52886 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| LOM31_RS27975 | 53060..53845 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOM31_RS27980 | 53849..55030 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| LOM31_RS27985 | 55079..55351 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| LOM31_RS27990 | 55404..56039 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| LOM31_RS27995 | 56131..56274 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| LOM31_RS28000 | 56593..56970 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| LOM31_RS28005 | 56963..57244 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| LOM31_RS28010 | 57219..57893 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| LOM31_RS28015 | 57886..58392 | + | 507 | WP_000566600.1 | hypothetical protein | - |
| LOM31_RS28020 | 58398..58709 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| LOM31_RS28025 | 58718..59218 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| LOM31_RS28030 | 59222..60649 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| LOM31_RS28035 | 60649..61305 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| LOM31_RS28040 | 61511..61729 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| LOM31_RS28045 | 61823..62440 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| LOM31_RS28050 | 62673..62951 | + | 279 | WP_014386427.1 | hypothetical protein | - |
| LOM31_RS28055 | 63043..63531 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| LOM31_RS28060 | 63546..65738 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| LOM31_RS28065 | 65738..65971 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| LOM31_RS28070 | 65953..66570 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| LOM31_RS28075 | 66738..69716 | + | 2979 | WP_001337757.1 | hypothetical protein | Relaxase |
| LOM31_RS28080 | 69713..71578 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| LOM31_RS28085 | 71628..72173 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| LOM31_RS28090 | 72130..72759 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| LOM31_RS28095 | 72769..73215 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| LOM31_RS28100 | 73225..73602 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| LOM31_RS28105 | 73602..74264 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| LOM31_RS28110 | 74445..74588 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| LOM31_RS28115 | 74600..74965 | + | 366 | WP_001052531.1 | hypothetical protein | - |
| LOM31_RS28120 | 75110..75391 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| LOM31_RS28125 | 75388..76014 | + | 627 | WP_001049716.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| LOM31_RS28130 | 75998..76915 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| LOM31_RS28135 | 76915..78228 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| LOM31_RS28140 | 78225..78803 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LOM31_RS28145 | 78807..79199 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| LOM31_RS28150 | 79400..84931 | + | 5532 | WP_000606833.1 | Ig-like domain-containing protein | - |
| LOM31_RS28155 | 85080..85787 | + | 708 | WP_001259347.1 | DsbC family protein | - |
| LOM31_RS28160 | 85784..88231 | + | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| LOM31_RS28165 | 88246..88563 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| LOM31_RS28170 | 88560..89090 | + | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| LOM31_RS28175 | 89053..90318 | + | 1266 | WP_000621288.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LOM31_RS28180 | 90315..90986 | + | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| LOM31_RS28185 | 90986..91990 | + | 1005 | WP_043940352.1 | TraU family protein | - |
| LOM31_RS28190 | 92106..94904 | + | 2799 | WP_001256487.1 | conjugal transfer mating pair stabilization protein TraN | - |
| LOM31_RS28195 | 94943..95803 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| LOM31_RS28200 | 95926..96567 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| LOM31_RS28205 | 96861..97181 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| LOM31_RS28210 | 97485..97670 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| LOM31_RS28215 | 97890..98858 | + | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| LOM31_RS28220 | 98869..99777 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| LOM31_RS28225 | 99838..100368 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| LOM31_RS28230 | 100463..101452 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| LOM31_RS28235 | 101515..102525 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| LOM31_RS28240 | 102725..104002 | + | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| LOM31_RS28245 | 104087..105883 | + | 1797 | WP_021598075.1 | VWA domain-containing protein | - |
| LOM31_RS28250 | 105945..106280 | + | 336 | WP_001071288.1 | hypothetical protein | - |
| LOM31_RS28255 | 106545..107084 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| LOM31_RS28260 | 107175..107675 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| LOM31_RS28265 | 107749..108633 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| LOM31_RS28270 | 108699..108923 | + | 225 | WP_001102700.1 | class I ribonucleotide reductase maintenance protein YfaE | - |
| LOM31_RS28275 | 108985..109374 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| LOM31_RS28280 | 109364..109816 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| LOM31_RS28285 | 110154..110345 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| LOM31_RS28290 | 110414..110767 | + | 354 | WP_000994741.1 | hypothetical protein | - |
| LOM31_RS28295 | 110959..111303 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| LOM31_RS28300 | 111381..111683 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| LOM31_RS28305 | 111761..113386 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| LOM31_RS28310 | 113447..113878 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| LOM31_RS28315 | 113952..114506 | + | 555 | WP_001093868.1 | hypothetical protein | - |
| LOM31_RS28320 | 114739..115125 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| LOM31_RS28325 | 115213..117666 | + | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| LOM31_RS28330 | 117868..118071 | + | 204 | WP_000050848.1 | hypothetical protein | - |
| LOM31_RS28335 | 118143..118748 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| LOM31_RS28340 | 118741..119010 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| LOM31_RS28345 | 119024..119242 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| LOM31_RS28350 | 119316..119873 | + | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| LOM31_RS28355 | 119948..120799 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| LOM31_RS28360 | 121257..121643 | + | 387 | WP_001077335.1 | hypothetical protein | - |
| LOM31_RS28365 | 121821..123548 | + | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| LOM31_RS28370 | 123535..123813 | + | 279 | WP_072647758.1 | hypothetical protein | - |
| LOM31_RS28375 | 123886..124125 | + | 240 | WP_000714162.1 | permease | - |
| LOM31_RS28380 | 124135..124251 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| LOM31_RS28385 | 124372..124746 | + | 375 | WP_000868821.1 | hypothetical protein | - |
| LOM31_RS28390 | 124860..125585 | + | 726 | WP_000988732.1 | hypothetical protein | - |
| LOM31_RS28395 | 125826..128630 | + | 2805 | Protein_160 | DUF6531 domain-containing protein | - |
| LOM31_RS28405 | 129857..131212 | + | 1356 | Protein_162 | tRNA3(Ser)-specific nuclease WapA | VF |
| LOM31_RS28410 | 131209..131481 | + | 273 | WP_000787563.1 | MafI family immunity protein | - |
| LOM31_RS28415 | 131486..131728 | + | 243 | WP_000750746.1 | hypothetical protein | - |
| LOM31_RS28420 | 131776..132075 | + | 300 | WP_011872911.1 | hypothetical protein | - |
| LOM31_RS28425 | 132242..132680 | + | 439 | Protein_166 | hypothetical protein | - |
| LOM31_RS28430 | 132696..133298 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| LOM31_RS28435 | 133560..133841 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| LOM31_RS28440 | 134140..134676 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| LOM31_RS28445 | 134679..135689 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| LOM31_RS28450 | 135694..136563 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| LOM31_RS28455 | 136560..137051 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| LOM31_RS28460 | 137378..138253 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| LOM31_RS28465 | 138406..139446 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| LOM31_RS28470 | 139733..141244 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| LOM31_RS28475 | 141355..142395 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| LOM31_RS28480 | 142397..143830 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| LOM31_RS28485 | 143843..147457 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LOM31_RS28490 | 147495..147857 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| LOM31_RS28495 | 148573..148845 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| LOM31_RS28500 | 148845..149378 | + | 534 | WP_032064504.1 | transglycosylase SLT domain-containing protein | - |
| LOM31_RS28505 | 149389..149997 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| LOM31_RS28510 | 149994..150545 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| LOM31_RS28515 | 150605..151024 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| LOM31_RS28520 | 151026..151319 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| LOM31_RS28525 | 151336..152319 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| LOM31_RS28530 | 152818..153357 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|