MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103339 bp
Accession: NZ_CP087654 Location: 1..103339 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD01653 Replicon: plasmid pDD01653-3
Accession: NZ_CP087654 Location: 1..103339 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD01653 Replicon: plasmid pDD01653-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL272_RS28905 (LL272_28905) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| LL272_RS28910 (LL272_28910) | 1567..2193 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| LL272_RS28915 (LL272_28915) | 2190..2492 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| LL272_RS28920 (LL272_28920) | 2948..3742 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| LL272_RS28925 (LL272_28925) | 3940..4956 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| LL272_RS28930 (LL272_28930) | 4967..5281 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| LL272_RS28935 (LL272_28935) | 5308..5703 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| LL272_RS28940 (LL272_28940) | 5872..6177 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LL272_RS28945 (LL272_28945) | 6179..6397 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LL272_RS28950 (LL272_28950) | 7028..7225 | + | 198 | WP_017899886.1 | hypothetical protein | - |
| LL272_RS28955 (LL272_28955) | 7215..7505 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| LL272_RS28960 (LL272_28960) | 7502..8629 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| LL272_RS28965 (LL272_28965) | 8663..10186 | - | 1524 | WP_223174996.1 | hypothetical protein | - |
| LL272_RS28970 (LL272_28970) | 10462..11241 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| LL272_RS28975 (LL272_28975) | 11254..11754 | - | 501 | WP_013023779.1 | HEPN family nuclease | - |
| LL272_RS28980 (LL272_28980) | 12029..12292 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| LL272_RS28985 (LL272_28985) | 12289..12855 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| LL272_RS28990 (LL272_28990) | 12886..13380 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| LL272_RS28995 (LL272_28995) | 13424..13792 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| LL272_RS29000 (LL272_29000) | 13826..14029 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| LL272_RS29005 (LL272_29005) | 14078..14335 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| LL272_RS29010 (LL272_29010) | 14411..14665 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| LL272_RS29015 (LL272_29015) | 14801..15577 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| LL272_RS29020 (LL272_29020) | 15818..16141 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| LL272_RS29025 (LL272_29025) | 16320..16589 | - | 270 | Protein_24 | SOS response-associated peptidase family protein | - |
| LL272_RS29030 (LL272_29030) | 16725..16892 | + | 168 | Protein_25 | IS5 family transposase IS903 | Transposase |
| LL272_RS29035 (LL272_29035) | 16948..17097 | + | 150 | Protein_26 | IS110 family transposase | - |
| LL272_RS29040 (LL272_29040) | 17380..18561 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| LL272_RS29045 (LL272_29045) | 19753..20610 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| LL272_RS29055 (LL272_29055) | 20912..21181 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| LL272_RS29060 (LL272_29060) | 21299..21808 | - | 510 | WP_052145515.1 | Phospholipase D | VF |
| LL272_RS29065 (LL272_29065) | 21982..23559 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| LL272_RS29070 (LL272_29070) | 23883..24587 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29075 (LL272_29075) | 24777..25592 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29080 (LL272_29080) | 25743..26447 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29085 (LL272_29085) | 26637..27452 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29090 (LL272_29090) | 27603..28307 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29095 (LL272_29095) | 28497..29312 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29100 (LL272_29100) | 29463..30167 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29105 (LL272_29105) | 30357..31172 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29110 (LL272_29110) | 31323..32027 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29115 (LL272_29115) | 32088..32924 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LL272_RS29120 (LL272_29120) | 32924..33727 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29125 (LL272_29125) | 33788..34603 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| LL272_RS29130 (LL272_29130) | 34912..35763 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| LL272_RS29135 (LL272_29135) | 35750..36469 | - | 720 | Protein_45 | helicase RepA family protein | - |
| LL272_RS29140 (LL272_29140) | 36519..37223 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29145 (LL272_29145) | 37374..38189 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LL272_RS29150 (LL272_29150) | 38379..39083 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29155 (LL272_29155) | 39148..39501 | - | 354 | Protein_49 | IS6 family transposase IS15DI | Transposase |
| LL272_RS29160 (LL272_29160) | 39564..39857 | - | 294 | Protein_50 | tunicamycin resistance protein | - |
| LL272_RS29165 (LL272_29165) | 39870..40730 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| LL272_RS29170 (LL272_29170) | 40963..41667 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29175 (LL272_29175) | 42138..43151 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LL272_RS29180 (LL272_29180) | 43443..43997 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LL272_RS29185 (LL272_29185) | 44094..44546 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LL272_RS29190 (LL272_29190) | 44679..45152 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| LL272_RS29195 (LL272_29195) | 45333..46178 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| LL272_RS29200 (LL272_29200) | 46295..46642 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| LL272_RS29205 (LL272_29205) | 46636..47475 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LL272_RS29210 (LL272_29210) | 47603..48103 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| LL272_RS29215 (LL272_29215) | 48424..48492 | + | 69 | Protein_61 | EAL domain-containing protein | - |
| LL272_RS29220 (LL272_29220) | 48610..49374 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LL272_RS29225 (LL272_29225) | 49867..50451 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LL272_RS29230 (LL272_29230) | 50451..51689 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LL272_RS29235 (LL272_29235) | 51686..52591 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LL272_RS29240 (LL272_29240) | 52713..53417 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LL272_RS29245 (LL272_29245) | 53482..53736 | + | 255 | Protein_67 | Tn3 family transposase | - |
| LL272_RS29250 (LL272_29250) | 53794..54036 | + | 243 | WP_000844627.1 | transposase | - |
| LL272_RS29255 (LL272_29255) | 54068..54718 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LL272_RS29260 (LL272_29260) | 54824..56023 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| LL272_RS29265 (LL272_29265) | 55990..56178 | - | 189 | Protein_71 | IS91 family transposase | - |
| LL272_RS29270 (LL272_29270) | 56290..56595 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LL272_RS29275 (LL272_29275) | 56623..57837 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| LL272_RS29280 (LL272_29280) | 58054..58689 | - | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| LL272_RS29285 (LL272_29285) | 58784..61789 | - | 3006 | WP_247284842.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LL272_RS29290 (LL272_29290) | 61953..62510 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LL272_RS29295 (LL272_29295) | 62693..63553 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LL272_RS29300 (LL272_29300) | 63812..64288 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| LL272_RS29305 (LL272_29305) | 64335..65210 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| LL272_RS29310 (LL272_29310) | 65545..65739 | - | 195 | Protein_80 | IS1380 family transposase | - |
| LL272_RS29315 (LL272_29315) | 65796..66493 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| LL272_RS29320 (LL272_29320) | 66509..67414 | - | 906 | Protein_82 | IS1380 family transposase ISEcp1 | Transposase |
| LL272_RS29325 (LL272_29325) | 67653..68395 | + | 743 | Protein_83 | ISKra4 family transposase ISKpn19 | Transposase |
| LL272_RS29330 (LL272_29330) | 68428..68856 | + | 429 | Protein_84 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LL272_RS29335 (LL272_29335) | 69175..69831 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| LL272_RS29340 (LL272_29340) | 70113..71504 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LL272_RS29345 (LL272_29345) | 71541..72113 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LL272_RS29350 (LL272_29350) | 72250..72795 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LL272_RS29355 (LL272_29355) | 72891..73466 | + | 576 | WP_077256884.1 | DUF4113 domain-containing protein | - |
| LL272_RS29360 (LL272_29360) | 73613..73894 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| LL272_RS29365 (LL272_29365) | 73875..74204 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LL272_RS29370 (LL272_29370) | 74440..74697 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| LL272_RS29375 (LL272_29375) | 74731..75435 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LL272_RS29380 (LL272_29380) | 75496..75897 | - | 402 | Protein_94 | DUF932 domain-containing protein | - |
| LL272_RS29385 (LL272_29385) | 76705..77913 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| LL272_RS29390 (LL272_29390) | 78049..78462 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| LL272_RS29395 (LL272_29395) | 78463..78741 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| LL272_RS29400 (LL272_29400) | 78731..79051 | - | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LL272_RS29405 (LL272_29405) | 79132..79356 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| LL272_RS29410 (LL272_29410) | 79367..79579 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| LL272_RS29415 (LL272_29415) | 79640..79996 | - | 357 | WP_014343501.1 | hypothetical protein | - |
| LL272_RS29420 (LL272_29420) | 80837..81154 | - | 318 | WP_014343505.1 | hypothetical protein | - |
| LL272_RS29425 (LL272_29425) | 81169..81519 | - | 351 | WP_040245917.1 | hypothetical protein | - |
| LL272_RS29430 (LL272_29430) | 81516..81788 | - | 273 | WP_040245921.1 | hypothetical protein | - |
| LL272_RS29435 (LL272_29435) | 82481..82600 | - | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| LL272_RS29440 (LL272_29440) | 82545..82697 | - | 153 | WP_004150508.1 | DUF5431 family protein | - |
| LL272_RS29445 (LL272_29445) | 82867..83241 | - | 375 | WP_014343510.1 | hypothetical protein | - |
| LL272_RS29450 (LL272_29450) | 83297..83623 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| LL272_RS29455 (LL272_29455) | 83620..84348 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| LL272_RS29460 (LL272_29460) | 84345..84776 | - | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| LL272_RS29465 (LL272_29465) | 84821..86878 | - | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| LL272_RS29470 (LL272_29470) | 86948..87196 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| LL272_RS29475 (LL272_29475) | 87245..87787 | - | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| LL272_RS29480 (LL272_29480) | 88617..89180 | - | 564 | WP_004152756.1 | methyltransferase | - |
| LL272_RS29485 (LL272_29485) | 89228..90583 | - | 1356 | WP_065801336.1 | DUF3560 domain-containing protein | - |
| LL272_RS29490 (LL272_29490) | 90635..90865 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| LL272_RS29495 (LL272_29495) | 90957..91184 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| LL272_RS29500 (LL272_29500) | 91864..92184 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| LL272_RS29505 (LL272_29505) | 92219..92473 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| LL272_RS29510 (LL272_29510) | 92661..92852 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| LL272_RS29515 (LL272_29515) | 92895..93401 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| LL272_RS29520 (LL272_29520) | 93444..93872 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| LL272_RS29525 (LL272_29525) | 94553..95320 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| LL272_RS29530 (LL272_29530) | 95374..95793 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| LL272_RS29535 (LL272_29535) | 95803..96024 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| LL272_RS29540 (LL272_29540) | 96024..96725 | - | 702 | WP_001568041.1 | DNA methylase | - |
| LL272_RS29545 (LL272_29545) | 96797..96966 | - | 170 | Protein_127 | hypothetical protein | - |
| LL272_RS29550 (LL272_29550) | 97162..97392 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| LL272_RS29555 (LL272_29555) | 97456..98127 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| LL272_RS29560 (LL272_29560) | 98130..99101 | - | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| LL272_RS29565 (LL272_29565) | 99350..100837 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| LL272_RS29570 (LL272_29570) | 101244..101675 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LL272_RS29575 (LL272_29575) | 101675..102946 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|