MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP087377 Location: 4132930..4143688 Organism: Escherichia coli strain RIVM_C019217 Replicon: chromosome
Accession: NZ_CP087377 Location: 4132930..4143688 Organism: Escherichia coli strain RIVM_C019217 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN359_RS20150 () | 4128276..4129058 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN359_RS20155 () | 4129374..4132583 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN359_RS20160 () | 4132930..4133400 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN359_RS20165 () | 4133397..4133499 | + | 103 | Protein_3955 | helix-turn-helix domain-containing protein | - |
| LN359_RS20170 () | 4133591..4133749 | + | 159 | Protein_3956 | integrase | - |
| LN359_RS20180 () | 4133954..4135207 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN359_RS20185 () | 4135219..4136322 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN359_RS20190 () | 4136610..4137665 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN359_RS20195 () | 4137704..4138105 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| LN359_RS20200 () | 4138163..4139407 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4138823..4138903 | - | 81 | NuclAT_10 | - | - |
| - () | 4138823..4138903 | - | 81 | NuclAT_10 | - | - |
| - () | 4138823..4138903 | - | 81 | NuclAT_10 | - | - |
| - () | 4138823..4138903 | - | 81 | NuclAT_10 | - | - |
| LN359_RS20205 () | 4139499..4139957 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN359_RS20210 () | 4140218..4141675 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN359_RS20215 () | 4141732..4142084 | - | 353 | Protein_3964 | peptide chain release factor H | - |
| LN359_RS20220 () | 4142080..4142286 | - | 207 | Protein_3965 | RtcB family protein | - |
| LN359_RS20225 () | 4142532..4142984 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN359_RS20230 () | 4142994..4143392 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN359_RS20235 () | 4143395..4143688 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN359_RS20240 () | 4143740..4144795 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN359_RS20245 () | 4144866..4145651 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN359_RS20250 () | 4145623..4147335 | + | 1713 | Protein_3971 | flagellar biosynthesis protein FlhA | - |
| LN359_RS20255 () | 4147440..4147718 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN359_RS20260 () | 4147711..4148067 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|