MGE detailed information
MGE type: Genomic_island MGE length: 8881 bp
Accession: NZ_CP087171 Location: 308763..317643 Organism: Pseudomonas atacamensis strain B21-045 Replicon: chromosome
Accession: NZ_CP087171 Location: 308763..317643 Organism: Pseudomonas atacamensis strain B21-045 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY27_RS01310 (LOY27_01310) | 304896..305642 | + | 747 | WP_016772154.1 | 2OG-Fe dioxygenase family protein | - |
| LOY27_RS01315 (LOY27_01315) | 305722..306099 | + | 378 | WP_003220700.1 | GNAT family N-acetyltransferase | - |
| LOY27_RS01320 (LOY27_01320) | 306096..306812 | + | 717 | WP_016772152.1 | AzlC family ABC transporter permease | - |
| LOY27_RS01325 (LOY27_01325) | 306791..307108 | + | 318 | WP_041477503.1 | AzlD domain-containing protein | - |
| LOY27_RS01330 (LOY27_01330) | 307025..307951 | - | 927 | WP_016772151.1 | LysR family transcriptional regulator | - |
| LOY27_RS01335 (LOY27_01335) | 308420..308686 | + | 267 | WP_122611118.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LOY27_RS01340 (LOY27_01340) | 308652..308966 | + | 315 | WP_122611117.1 | type II toxin-antitoxin system YafQ family toxin | - |
| LOY27_RS01345 (LOY27_01345) | 309104..309511 | + | 408 | WP_110602169.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOY27_RS01350 (LOY27_01350) | 309508..310188 | + | 681 | WP_160768526.1 | RES family NAD+ phosphorylase | - |
| LOY27_RS01360 (LOY27_01360) | 310766..312022 | - | 1257 | WP_160768525.1 | methyltransferase | - |
| LOY27_RS01365 (LOY27_01365) | 312003..312692 | - | 690 | WP_016772145.1 | ABC transporter permease | - |
| LOY27_RS01370 (LOY27_01370) | 312689..313384 | - | 696 | WP_024011207.1 | ABC transporter permease | - |
| LOY27_RS01375 (LOY27_01375) | 313462..314214 | - | 753 | WP_130900469.1 | ABC transporter substrate-binding protein | - |
| LOY27_RS01380 (LOY27_01380) | 314228..315001 | - | 774 | WP_024011209.1 | Octopine permease ATP-binding protein P | VF |
| LOY27_RS01385 (LOY27_01385) | 315545..316936 | + | 1392 | WP_016772141.1 | GABA permease | - |
| LOY27_RS01390 (LOY27_01390) | 317015..317413 | - | 399 | WP_016772140.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LOY27_RS01395 (LOY27_01395) | 317413..317643 | - | 231 | WP_024011210.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LOY27_RS01400 (LOY27_01400) | 317809..318261 | - | 453 | WP_016772138.1 | hypothetical protein | - |
| LOY27_RS01405 (LOY27_01405) | 318268..318681 | - | 414 | WP_016772137.1 | hypothetical protein | - |
| LOY27_RS01410 (LOY27_01410) | 318711..319685 | - | 975 | WP_258710848.1 | alpha/beta fold hydrolase | - |
| LOY27_RS01415 (LOY27_01415) | 319753..320811 | - | 1059 | WP_258711664.1 | PDDEXK nuclease domain-containing protein | - |
| LOY27_RS01420 (LOY27_01420) | 321093..321437 | - | 345 | WP_122699890.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|