MGE detailed information
MGE type: Genomic_island MGE length: 8881 bp
Accession: NZ_CP087167 Location: 315555..324435 Organism: Pseudomonas atacamensis strain B21-050 Replicon: chromosome
Accession: NZ_CP087167 Location: 315555..324435 Organism: Pseudomonas atacamensis strain B21-050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LOY49_RS01330 (LOY49_01330) | 311688..312434 | + | 747 | WP_016772154.1 | 2OG-Fe dioxygenase family protein | - |
LOY49_RS01335 (LOY49_01335) | 312514..312891 | + | 378 | WP_003220700.1 | GNAT family N-acetyltransferase | - |
LOY49_RS01340 (LOY49_01340) | 312888..313604 | + | 717 | WP_016772152.1 | AzlC family ABC transporter permease | - |
LOY49_RS01345 (LOY49_01345) | 313583..313900 | + | 318 | WP_041477503.1 | AzlD domain-containing protein | - |
LOY49_RS01350 (LOY49_01350) | 313817..314743 | - | 927 | WP_016772151.1 | LysR family transcriptional regulator | - |
LOY49_RS01355 (LOY49_01355) | 315212..315478 | + | 267 | WP_122611118.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
LOY49_RS01360 (LOY49_01360) | 315444..315758 | + | 315 | WP_122611117.1 | type II toxin-antitoxin system YafQ family toxin | - |
LOY49_RS01365 (LOY49_01365) | 315896..316303 | + | 408 | WP_110602169.1 | MbcA/ParS/Xre antitoxin family protein | - |
LOY49_RS01370 (LOY49_01370) | 316300..316980 | + | 681 | WP_160768526.1 | RES family NAD+ phosphorylase | - |
LOY49_RS01380 (LOY49_01380) | 317558..318814 | - | 1257 | WP_160768525.1 | methyltransferase | - |
LOY49_RS01385 (LOY49_01385) | 318795..319484 | - | 690 | WP_016772145.1 | ABC transporter permease | - |
LOY49_RS01390 (LOY49_01390) | 319481..320176 | - | 696 | WP_016772144.1 | ABC transporter permease | - |
LOY49_RS01395 (LOY49_01395) | 320254..321006 | - | 753 | WP_122881268.1 | ABC transporter substrate-binding protein | - |
LOY49_RS01400 (LOY49_01400) | 321020..321793 | - | 774 | WP_024011209.1 | Octopine permease ATP-binding protein P | VF |
LOY49_RS01405 (LOY49_01405) | 322337..323728 | + | 1392 | WP_016772141.1 | GABA permease | - |
LOY49_RS01410 (LOY49_01410) | 323807..324205 | - | 399 | WP_016772140.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
LOY49_RS01415 (LOY49_01415) | 324205..324435 | - | 231 | WP_024011210.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
LOY49_RS01420 (LOY49_01420) | 324601..325053 | - | 453 | WP_016772138.1 | hypothetical protein | - |
LOY49_RS01425 (LOY49_01425) | 325060..325473 | - | 414 | WP_016772137.1 | hypothetical protein | - |
LOY49_RS01430 (LOY49_01430) | 325503..326438 | - | 936 | WP_258604492.1 | alpha/beta fold hydrolase | - |
LOY49_RS01435 (LOY49_01435) | 326545..327603 | - | 1059 | WP_122611110.1 | PDDEXK nuclease domain-containing protein | - |
LOY49_RS01440 (LOY49_01440) | 327885..328229 | - | 345 | WP_160768523.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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