MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82301 bp
Accession: NZ_CP087097 Location: 1..82301 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-26 Replicon: plasmid P7
Accession: NZ_CP087097 Location: 1..82301 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-26 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE12_RS24170 (LOE12_24170) | 851..1084 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE12_RS24175 (LOE12_24175) | 1213..1518 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE12_RS24180 (LOE12_24180) | 1505..2434 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE12_RS24185 (LOE12_24185) | 2665..3093 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE12_RS24190 (LOE12_24190) | 3153..3791 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE12_RS24195 (LOE12_24195) | 3893..5107 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE12_RS24200 (LOE12_24200) | 5171..6145 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE12_RS24205 (LOE12_24205) | 6151..7686 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE12_RS24210 (LOE12_24210) | 7948..9687 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE12_RS24215 (LOE12_24215) | 9698..10603 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE12_RS24220 (LOE12_24220) | 10674..10967 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE12_RS24225 (LOE12_24225) | 10960..11235 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE12_RS24230 (LOE12_24230) | 11704..12474 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE12_RS24235 (LOE12_24235) | 12566..14113 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE12_RS24240 (LOE12_24240) | 14130..15446 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE12_RS24245 (LOE12_24245) | 15446..16624 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE12_RS24250 (LOE12_24250) | 16823..17518 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE12_RS24255 (LOE12_24255) | 17809..18687 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE12_RS24260 (LOE12_24260) | 18684..19739 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE12_RS24265 (LOE12_24265) | 19736..20296 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE12_RS24270 (LOE12_24270) | 20385..21302 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE12_RS24275 (LOE12_24275) | 21339..22265 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE12_RS24280 (LOE12_24280) | 22265..24007 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE12_RS24285 (LOE12_24285) | 24020..25216 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE12_RS24290 (LOE12_24290) | 25229..26749 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE12_RS24295 (LOE12_24295) | 26831..27895 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE12_RS24300 (LOE12_24300) | 28064..28996 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE12_RS24305 (LOE12_24305) | 29086..29388 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE12_RS24310 (LOE12_24310) | 29400..30266 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE12_RS24315 (LOE12_24315) | 30675..31631 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE12_RS24320 (LOE12_24320) | 31761..33284 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE12_RS24325 (LOE12_24325) | 33453..35288 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE12_RS24330 (LOE12_24330) | 35497..36183 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE12_RS24335 (LOE12_24335) | 36180..36887 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE12_RS24340 (LOE12_24340) | 37000..37755 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE12_RS24345 (LOE12_24345) | 38330..39919 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE12_RS24350 (LOE12_24350) | 39916..41352 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE12_RS24355 (LOE12_24355) | 41489..42499 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE12_RS24360 (LOE12_24360) | 43125..44327 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE12_RS24365 (LOE12_24365) | 44324..45304 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE12_RS24370 (LOE12_24370) | 45403..47475 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE12_RS24375 (LOE12_24375) | 47487..48107 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE12_RS24380 (LOE12_24380) | 48304..49548 | + | 1245 | WP_224557592.1 | trypsin-like peptidase domain-containing protein | - |
| LOE12_RS24385 (LOE12_24385) | 49541..50236 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE12_RS24390 (LOE12_24390) | 50233..51558 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE12_RS24395 (LOE12_24395) | 51600..53054 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE12_RS24400 (LOE12_24400) | 53212..53799 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE12_RS24405 (LOE12_24405) | 54087..54650 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE12_RS24410 (LOE12_24410) | 54814..56784 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE12_RS24415 (LOE12_24415) | 56790..57836 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE12_RS24420 (LOE12_24420) | 57806..60532 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE12_RS24425 (LOE12_24425) | 60671..61378 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE12_RS24430 (LOE12_24430) | 61387..63060 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE12_RS24435 (LOE12_24435) | 63476..64105 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE12_RS24440 (LOE12_24440) | 64129..65571 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE12_RS24445 (LOE12_24445) | 65597..67282 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE12_RS24450 (LOE12_24450) | 67304..69178 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE12_RS24455 (LOE12_24455) | 69264..70226 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE12_RS24460 (LOE12_24460) | 70493..71245 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE12_RS24465 (LOE12_24465) | 71242..72027 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE12_RS24470 (LOE12_24470) | 72020..72715 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE12_RS24475 (LOE12_24475) | 72731..73447 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE12_RS24480 (LOE12_24480) | 73457..73774 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE12_RS24485 (LOE12_24485) | 73805..75253 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE12_RS24490 (LOE12_24490) | 75250..76014 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE12_RS24495 (LOE12_24495) | 76058..76987 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE12_RS24500 (LOE12_24500) | 76984..78093 | - | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE12_RS24505 (LOE12_24505) | 78202..81093 | - | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE12_RS24510 (LOE12_24510) | 81260..81847 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE12_RS24515 (LOE12_24515) | 81936..82196 | - | 261 | Protein_70 | hydantoinase B/oxoprolinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|