MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82233 bp
Accession: NZ_CP087089 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-1 Replicon: plasmid P6
Accession: NZ_CP087089 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-1 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE33_RS24450 (LOE33_24405) | 682..1377 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE33_RS24455 (LOE33_24410) | 1370..2155 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE33_RS24460 (LOE33_24415) | 2152..2904 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE33_RS24465 (LOE33_24420) | 3171..4133 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE33_RS24470 (LOE33_24425) | 4219..6093 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE33_RS24475 (LOE33_24430) | 6115..7800 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE33_RS24480 (LOE33_24435) | 7826..9268 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE33_RS24485 (LOE33_24440) | 9292..9921 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE33_RS24490 (LOE33_24445) | 10337..12010 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE33_RS24495 (LOE33_24450) | 12019..12726 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE33_RS24500 (LOE33_24455) | 12865..15591 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE33_RS24505 (LOE33_24460) | 15561..16607 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE33_RS24510 (LOE33_24465) | 16613..18586 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE33_RS24515 (LOE33_24470) | 18747..19310 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE33_RS24520 (LOE33_24475) | 19598..20185 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE33_RS24525 (LOE33_24480) | 20343..21797 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE33_RS24530 (LOE33_24485) | 21839..23164 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE33_RS24535 (LOE33_24490) | 23161..23856 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE33_RS24540 (LOE33_24495) | 23849..25099 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE33_RS24545 (LOE33_24500) | 25290..25910 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE33_RS24550 (LOE33_24505) | 25910..27994 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE33_RS24555 (LOE33_24510) | 28093..29073 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE33_RS24560 (LOE33_24515) | 29070..30272 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE33_RS24565 (LOE33_24520) | 30898..31908 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE33_RS24570 (LOE33_24525) | 32045..33481 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE33_RS24575 (LOE33_24530) | 33478..35067 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE33_RS24580 (LOE33_24535) | 35642..36397 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE33_RS24585 (LOE33_24540) | 36510..37217 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE33_RS24590 (LOE33_24545) | 37214..37900 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE33_RS24595 (LOE33_24550) | 38109..39944 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE33_RS24600 (LOE33_24555) | 40113..41636 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE33_RS24605 (LOE33_24560) | 41766..42722 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE33_RS24610 (LOE33_24565) | 43131..43997 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE33_RS24615 (LOE33_24570) | 44009..44311 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE33_RS24620 (LOE33_24575) | 44401..45333 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE33_RS24625 (LOE33_24580) | 45502..46566 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE33_RS24630 (LOE33_24585) | 46648..48168 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE33_RS24635 (LOE33_24590) | 48181..49377 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE33_RS24640 (LOE33_24595) | 49390..51132 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE33_RS24645 (LOE33_24600) | 51132..52058 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE33_RS24650 (LOE33_24605) | 52095..53012 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE33_RS24655 (LOE33_24610) | 53101..53661 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE33_RS24660 (LOE33_24615) | 53658..54713 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE33_RS24665 (LOE33_24620) | 54710..55588 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE33_RS24670 (LOE33_24625) | 55879..56574 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE33_RS24675 (LOE33_24630) | 56773..57951 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE33_RS24680 (LOE33_24635) | 57951..59267 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE33_RS24685 (LOE33_24640) | 59284..60831 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE33_RS24690 (LOE33_24645) | 60923..61693 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE33_RS24695 (LOE33_24650) | 62162..62437 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE33_RS24700 (LOE33_24655) | 62430..62723 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE33_RS24705 (LOE33_24660) | 62794..63699 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE33_RS24710 (LOE33_24665) | 63710..65449 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE33_RS24715 (LOE33_24670) | 65711..67246 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE33_RS24720 (LOE33_24675) | 67252..68226 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE33_RS24725 (LOE33_24680) | 68290..69504 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE33_RS24730 (LOE33_24685) | 69606..70244 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE33_RS24735 (LOE33_24690) | 70304..70732 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE33_RS24740 (LOE33_24695) | 70963..71892 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE33_RS24745 (LOE33_24700) | 71879..72184 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE33_RS24750 (LOE33_24705) | 72313..72546 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE33_RS24755 (LOE33_24710) | 72885..73703 | + | 819 | Protein_62 | GTP-binding protein | - |
| LOE33_RS24760 (LOE33_24715) | 73782..74369 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE33_RS24765 (LOE33_24720) | 74536..77428 | + | 2893 | Protein_64 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE33_RS24770 (LOE33_24725) | 77537..78646 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE33_RS24775 (LOE33_24730) | 78643..79572 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE33_RS24780 (LOE33_24735) | 79616..80380 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE33_RS24785 (LOE33_24740) | 80377..81825 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE33_RS24790 (LOE33_24745) | 81856..82173 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|