MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP087058 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-43 Replicon: plasmid P7
Accession: NZ_CP087058 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-43 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE36_RS24415 (LOE36_24450) | 292..1266 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE36_RS24420 (LOE36_24455) | 1272..2807 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE36_RS24425 (LOE36_24460) | 3069..4808 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE36_RS24430 (LOE36_24465) | 4819..5724 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE36_RS24435 (LOE36_24470) | 5795..6088 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE36_RS24440 (LOE36_24475) | 6081..6356 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE36_RS24445 (LOE36_24480) | 6825..7595 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE36_RS24450 (LOE36_24485) | 7687..9234 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE36_RS24455 (LOE36_24490) | 9251..10567 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE36_RS24460 (LOE36_24495) | 10567..11745 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE36_RS24465 (LOE36_24500) | 11944..12639 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE36_RS24470 (LOE36_24505) | 12930..13808 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE36_RS24475 (LOE36_24510) | 13805..14860 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE36_RS24480 (LOE36_24515) | 14857..15417 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE36_RS24485 (LOE36_24520) | 15506..16423 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE36_RS24490 (LOE36_24525) | 16460..17386 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE36_RS24495 (LOE36_24530) | 17386..19128 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE36_RS24500 (LOE36_24535) | 19141..20337 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE36_RS24505 (LOE36_24540) | 20350..21870 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE36_RS24510 (LOE36_24545) | 21952..23016 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE36_RS24515 (LOE36_24550) | 23185..24117 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE36_RS24520 (LOE36_24555) | 24207..24509 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE36_RS24525 (LOE36_24560) | 24521..25387 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE36_RS24530 (LOE36_24565) | 25796..26752 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE36_RS24535 (LOE36_24570) | 26882..28405 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE36_RS24540 (LOE36_24575) | 28574..30409 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE36_RS24545 (LOE36_24580) | 30618..31304 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE36_RS24550 (LOE36_24585) | 31301..32008 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE36_RS24555 (LOE36_24590) | 32121..32876 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE36_RS24560 (LOE36_24595) | 33451..35040 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE36_RS24565 (LOE36_24600) | 35037..36473 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE36_RS24570 (LOE36_24605) | 36610..37620 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE36_RS24575 (LOE36_24610) | 38246..39448 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE36_RS24580 (LOE36_24615) | 39445..40425 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE36_RS24585 (LOE36_24620) | 40524..42596 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE36_RS24590 (LOE36_24625) | 42608..43228 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE36_RS24595 (LOE36_24630) | 43386..44669 | + | 1284 | WP_229940774.1 | trypsin-like peptidase domain-containing protein | - |
| LOE36_RS24600 (LOE36_24635) | 44662..45357 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE36_RS24605 (LOE36_24640) | 45354..46679 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE36_RS24610 (LOE36_24645) | 46721..48175 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE36_RS24615 (LOE36_24650) | 48333..48920 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE36_RS24620 (LOE36_24655) | 49208..49771 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE36_RS24625 (LOE36_24660) | 49932..51905 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE36_RS24630 (LOE36_24665) | 51911..52957 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE36_RS24635 (LOE36_24670) | 52927..55653 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE36_RS24640 (LOE36_24675) | 55792..56499 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE36_RS24645 (LOE36_24680) | 56508..58181 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE36_RS24650 (LOE36_24685) | 58597..59226 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE36_RS24655 (LOE36_24690) | 59250..60692 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE36_RS24660 (LOE36_24695) | 60718..62403 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE36_RS24665 (LOE36_24700) | 62425..64299 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE36_RS24670 (LOE36_24705) | 64385..65347 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE36_RS24675 (LOE36_24710) | 65614..66366 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE36_RS24680 (LOE36_24715) | 66363..67148 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE36_RS24685 (LOE36_24720) | 67141..67836 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE36_RS24690 (LOE36_24725) | 67852..68568 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE36_RS24695 (LOE36_24730) | 68578..68895 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE36_RS24700 (LOE36_24735) | 68926..70374 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE36_RS24705 (LOE36_24740) | 70371..71135 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE36_RS24710 (LOE36_24745) | 71179..72108 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE36_RS24715 (LOE36_24750) | 72105..73247 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE36_RS24720 (LOE36_24755) | 73323..76213 | - | 2891 | Protein_62 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE36_RS24725 (LOE36_24760) | 76380..76967 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE36_RS24730 (LOE36_24765) | 77046..77864 | - | 819 | Protein_64 | GTP-binding protein | - |
| LOE36_RS24735 (LOE36_24770) | 78203..78436 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE36_RS24740 (LOE36_24775) | 78565..78870 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE36_RS24745 (LOE36_24780) | 78857..79786 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE36_RS24750 (LOE36_24785) | 80017..80445 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE36_RS24755 (LOE36_24790) | 80505..81143 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|