MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110566 bp
Accession: NZ_CP087047 Location: 1..110566 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-18 Replicon: plasmid P5
Accession: NZ_CP087047 Location: 1..110566 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-18 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE42_RS22205 (LOE42_22200) | 103..531 | + | 429 | WP_013959865.1 | helix-turn-helix domain-containing protein | - |
| LOE42_RS22210 (LOE42_22205) | 635..1213 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE42_RS22215 (LOE42_22210) | 1310..2065 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE42_RS22220 (LOE42_22215) | 2055..3020 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE42_RS22225 (LOE42_22220) | 3162..3362 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE42_RS22230 (LOE42_22225) | 3359..3850 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE42_RS22235 (LOE42_22230) | 3847..4587 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE42_RS22240 (LOE42_22235) | 4688..5452 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE42_RS22245 (LOE42_22240) | 5475..6347 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE42_RS22250 (LOE42_22245) | 6471..6890 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE42_RS22255 (LOE42_22250) | 6910..9417 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE42_RS22260 (LOE42_22255) | 9558..9758 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE42_RS22265 (LOE42_22260) | 9957..10379 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE42_RS22270 (LOE42_22265) | 10674..12137 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE42_RS22275 (LOE42_22270) | 12149..13507 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE42_RS22280 (LOE42_22275) | 13555..14205 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE42_RS22285 (LOE42_22280) | 14189..14971 | + | 783 | Protein_16 | LysR family transcriptional regulator | - |
| LOE42_RS22290 (LOE42_22285) | 15089..17089 | - | 2001 | WP_224557516.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE42_RS22295 (LOE42_22290) | 17098..19431 | - | 2334 | WP_224557515.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LOE42_RS22300 (LOE42_22295) | 19418..19975 | - | 558 | WP_224557513.1 | transposase | - |
| LOE42_RS22305 (LOE42_22300) | 20528..20734 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE42_RS22310 (LOE42_22305) | 21273..22202 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE42_RS22315 (LOE42_22310) | 23181..23897 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE42_RS22320 (LOE42_22315) | 23933..24700 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE42_RS22325 (LOE42_22320) | 24989..25267 | + | 279 | Protein_24 | transposase | - |
| LOE42_RS22330 (LOE42_22325) | 25428..26873 | + | 1446 | WP_229939271.1 | IS21 family transposase | - |
| LOE42_RS22335 (LOE42_22330) | 26870..27484 | + | 615 | Protein_26 | IS21-like element helper ATPase IstB | - |
| LOE42_RS22340 (LOE42_22335) | 27564..29162 | + | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE42_RS22345 (LOE42_22340) | 29172..29966 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE42_RS22350 (LOE42_22345) | 29963..31966 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE42_RS22355 (LOE42_22350) | 31963..33129 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE42_RS22360 (LOE42_22355) | 33449..33949 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE42_RS22365 (LOE42_22360) | 34112..35314 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE42_RS22370 (LOE42_22365) | 35343..36629 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE42_RS22375 (LOE42_22370) | 36626..37141 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE42_RS22380 (LOE42_22375) | 37207..37974 | + | 768 | WP_211568985.1 | SDR family oxidoreductase | - |
| LOE42_RS22385 (LOE42_22380) | 37971..38297 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE42_RS22390 (LOE42_22385) | 38272..38973 | + | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE42_RS22395 (LOE42_22390) | 39028..40194 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE42_RS22400 (LOE42_22395) | 40221..41093 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE42_RS22405 (LOE42_22400) | 41086..42144 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE42_RS22410 (LOE42_22405) | 42141..42941 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE42_RS22415 (LOE42_22410) | 42934..43740 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE42_RS22420 (LOE42_22415) | 43748..44602 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE42_RS22425 (LOE42_22420) | 44635..45489 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE42_RS22430 (LOE42_22425) | 45587..46588 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE42_RS22435 (LOE42_22430) | 46627..47415 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE42_RS22440 (LOE42_22435) | 47420..48355 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE42_RS22445 (LOE42_22440) | 48352..49392 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE42_RS22450 (LOE42_22445) | 49389..50210 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE42_RS22455 (LOE42_22450) | 50391..50783 | - | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE42_RS22465 (LOE42_22460) | 52158..52439 | + | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE42_RS22470 (LOE42_22465) | 52978..53495 | - | 518 | Protein_53 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE42_RS22475 (LOE42_22470) | 53492..53818 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE42_RS22480 (LOE42_22475) | 53942..54595 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE42_RS22485 (LOE42_22480) | 54595..55287 | - | 693 | WP_224557484.1 | regulator | - |
| LOE42_RS22490 (LOE42_22485) | 55360..57342 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE42_RS22495 (LOE42_22490) | 57810..58840 | - | 1031 | Protein_58 | IS110 family transposase | - |
| LOE42_RS22500 (LOE42_22495) | 59055..59444 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE42_RS22505 (LOE42_22500) | 59532..59804 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE42_RS22510 (LOE42_22505) | 59828..60766 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE42_RS22515 (LOE42_22510) | 60807..61277 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE42_RS22520 (LOE42_22515) | 61630..61923 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE42_RS22525 (LOE42_22520) | 61952..62113 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE42_RS22530 (LOE42_22525) | 62249..62950 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE42_RS22535 (LOE42_22530) | 62947..64854 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE42_RS22540 (LOE42_22535) | 64860..65840 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE42_RS22545 (LOE42_22540) | 65821..68028 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE42_RS22550 (LOE42_22545) | 68040..68510 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE42_RS22555 (LOE42_22550) | 68546..68926 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE42_RS22560 (LOE42_22555) | 69107..70492 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE42_RS22565 (LOE42_22560) | 70449..70766 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE42_RS22570 (LOE42_22565) | 70912..71571 | + | 660 | WP_009503873.1 | response regulator transcription factor | - |
| LOE42_RS22575 (LOE42_22570) | 71568..72935 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE42_RS22580 (LOE42_22575) | 73092..74853 | - | 1762 | Protein_75 | ParB N-terminal domain-containing protein | - |
| LOE42_RS22585 (LOE42_22580) | 75022..76233 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE42_RS22590 (LOE42_22585) | 76447..77379 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE42_RS22595 (LOE42_22590) | 77363..78556 | - | 1194 | WP_009503867.1 | plasmid partitioning protein RepA | - |
| LOE42_RS22600 (LOE42_22595) | 78765..78992 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE42_RS22605 (LOE42_22600) | 78982..79377 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE42_RS22610 (LOE42_22605) | 79456..79947 | - | 492 | Protein_81 | recombinase family protein | - |
| LOE42_RS22615 (LOE42_22610) | 80049..81188 | - | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE42_RS22620 (LOE42_22615) | 81315..82199 | + | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE42_RS22625 (LOE42_22620) | 82247..82858 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE42_RS22630 (LOE42_22625) | 83882..84748 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE42_RS22635 (LOE42_22630) | 84765..86399 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE42_RS22640 (LOE42_22635) | 86548..87558 | + | 1011 | WP_229940882.1 | hypothetical protein | - |
| LOE42_RS22645 (LOE42_22640) | 87886..89067 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE42_RS22650 (LOE42_22645) | 89064..90062 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE42_RS22655 (LOE42_22650) | 90389..90841 | + | 453 | WP_054540798.1 | manganese-binding transcriptional regulator MntR | - |
| LOE42_RS22660 (LOE42_22655) | 90836..91285 | - | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE42_RS22665 (LOE42_22660) | 91447..92892 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE42_RS22670 (LOE42_22665) | 92910..93839 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE42_RS22675 (LOE42_22670) | 93839..94333 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE42_RS22680 (LOE42_22675) | 94395..94847 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE42_RS22685 (LOE42_22680) | 95139..95801 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE42_RS22690 (LOE42_22685) | 95849..96133 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE42_RS22695 (LOE42_22690) | 96316..98670 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE42_RS22700 (LOE42_22695) | 98705..98971 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE42_RS22705 (LOE42_22700) | 99154..99666 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE42_RS22710 (LOE42_22705) | 99886..100887 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE42_RS22715 (LOE42_22710) | 100884..102785 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE42_RS22720 (LOE42_22715) | 102846..103013 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE42_RS22725 (LOE42_22720) | 103004..104617 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE42_RS22730 (LOE42_22725) | 104584..105042 | - | 459 | WP_224557524.1 | signal peptidase II | - |
| LOE42_RS22735 (LOE42_22730) | 105071..105853 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE42_RS22740 (LOE42_22735) | 105866..106321 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE42_RS22745 (LOE42_22740) | 106325..107698 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE42_RS22750 (LOE42_22745) | 107695..108321 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE42_RS22755 (LOE42_22750) | 108321..108788 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE42_RS22760 (LOE42_22755) | 108812..109471 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE42_RS22765 (LOE42_22760) | 109468..109890 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE42_RS22770 (LOE42_22765) | 109896..110462 | - | 567 | WP_028095363.1 | SCO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|