NZ_CP0870201..168034

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 168034 bp
Accession: NZ_CP087020        Location: 1..168034         Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-70       Replicon: plasmid P4


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOE45_RS20435 (LOE45_20445) 547..1101 - 555 WP_224558005.1 hypothetical protein -
LOE45_RS20440 (LOE45_20450) 2739..2846 - 108 Protein_1 transposase -
LOE45_RS20445 (LOE45_20455) 3061..4587 - 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE45_RS20450 (LOE45_20460) 4666..5013 - 348 WP_224558021.1 IS66 family transposase ISAzs18 Transposase
LOE45_RS20455 (LOE45_20465) 5010..5288 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE45_RS20460 (LOE45_20475) 6583..6804 - 222 WP_224557965.1 hypothetical protein -
LOE45_RS20465 (LOE45_20480) 6807..8438 - 1632 WP_224557964.1 IS66 family transposase ISRel24 Transposase
LOE45_RS20470 (LOE45_20485) 8499..8849 - 351 WP_224557963.1 IS66 family transposase ISRel24 Transposase
LOE45_RS20475 (LOE45_20490) 8849..9250 - 402 WP_224557962.1 IS66 family transposase ISRel24 Transposase
LOE45_RS20480 (LOE45_20495) 9970..13200 - 3231 WP_224557960.1 type II CRISPR RNA-guided endonuclease Cas9 -
LOE45_RS20485 (LOE45_20500) 13753..13914 + 162 WP_224557958.1 IS256 family transposase ISPa1328 Transposase
LOE45_RS20490 (LOE45_20505) 14002..14766 - 765 WP_224558013.1 IS21 family transposase ISFK1 Transposase
LOE45_RS20495 (LOE45_20510) 14781..16319 - 1539 WP_229939051.1 IS21 family transposase ISFK1 Transposase
LOE45_RS20500 (LOE45_20515) 16573..17787 - 1215 WP_224558000.1 IS256 family transposase ISPa1328 Transposase
LOE45_RS20505 (LOE45_20520) 17732..18559 - 828 WP_224557999.1 AAA family ATPase -
LOE45_RS20510 (LOE45_20525) 18542..19500 + 959 Protein_15 IS481 family transposase -
LOE45_RS20515 (LOE45_20530) 20189..20347 + 159 WP_224557998.1 IS110 family transposase ISMdi12 Transposase
LOE45_RS20520 (LOE45_20535) 20430..21676 + 1247 Protein_17 IS3 family transposase ISGxy1 Transposase
LOE45_RS20525 (LOE45_20540) 21616..23142 - 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE45_RS20530 (LOE45_20545) 23221..23568 - 348 WP_224558021.1 IS66 family transposase ISAzs18 Transposase
LOE45_RS20535 (LOE45_20550) 23565..23843 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE45_RS20540 (LOE45_20555) 24129..24722 - 594 WP_224556993.1 SMC-Scp complex subunit ScpB -
LOE45_RS20545 (LOE45_20560) 24725..25609 - 885 WP_224556992.1 DUF1403 family protein -
LOE45_RS20550 (LOE45_20565) 25724..26026 + 303 WP_224556991.1 hypothetical protein -
LOE45_RS20555 (LOE45_20570) 26136..26240 - 105 WP_229939115.1 hypothetical protein -
LOE45_RS20560 (LOE45_20575) 26661..27050 + 390 WP_224556990.1 helix-turn-helix domain-containing protein -
LOE45_RS20565 (LOE45_20580) 28825..28998 + 174 WP_229939113.1 DDE-type integrase/transposase/recombinase -
LOE45_RS20570 (LOE45_20585) 29284..29996 - 713 Protein_27 IS6 family transposase -
LOE45_RS20575 (LOE45_20590) 29890..30393 - 504 WP_224556988.1 type II toxin-antitoxin system VapC family toxin -
LOE45_RS20580 (LOE45_20595) 30420..30635 - 216 WP_224556986.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
LOE45_RS20585 (LOE45_20600) 30736..31350 - 615 WP_224556984.1 SMC-Scp complex subunit ScpB -
LOE45_RS20590 (LOE45_20605) 31353..32237 - 885 WP_224556983.1 DUF1403 family protein -
LOE45_RS20595 (LOE45_20610) 32954..33544 - 591 Protein_32 NAD(P)H-dependent oxidoreductase -
LOE45_RS20600 (LOE45_20615) 34022..36481 - 2460 WP_224556981.1 hypothetical protein -
LOE45_RS20605 (LOE45_20620) 36485..37321 - 837 WP_224556979.1 5-dehydro-4-deoxy-D-glucuronate isomerase -
LOE45_RS20610 (LOE45_20625) 37564..38580 + 1017 WP_224556977.1 LacI family DNA-binding transcriptional regulator -
LOE45_RS20615 (LOE45_20630) 38585..39325 - 741 WP_224556975.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VF
LOE45_RS20620 (LOE45_20635) 39339..40646 - 1308 WP_229939144.1 TRAP transporter large permease -
LOE45_RS20625 (LOE45_20640) 40669..41169 - 501 WP_224556969.1 TRAP transporter small permease -
LOE45_RS20630 (LOE45_20645) 41477..42544 + 1068 WP_224556967.1 TRAP transporter substrate-binding protein -
LOE45_RS20635 (LOE45_20650) 42576..43673 + 1098 WP_229939103.1 glycoside hydrolase family 88 protein -
LOE45_RS20640 (LOE45_20655) 43761..43919 + 159 Protein_41 short-chain dehydrogenase -
LOE45_RS20645 (LOE45_20660) 44402..45601 + 1200 WP_037930394.1 Cell division protein PomZ VF
LOE45_RS20650 (LOE45_20665) 45601..46572 + 972 WP_224556962.1 plasmid partitioning protein RepB -
LOE45_RS20655 (LOE45_20670) 46811..47866 + 1056 WP_224556960.1 plasmid replication protein RepC -
LOE45_RS20660 (LOE45_20675) 49696..50577 + 882 WP_224556958.1 zinc-binding dehydrogenase -
LOE45_RS20665 (LOE45_20680) 50795..51498 - 704 Protein_46 IS6 family transposase ISRH1 Transposase
LOE45_RS20670 51940..52407 + 468 WP_224556957.1 hypothetical protein -
LOE45_RS20675 (LOE45_20690) 52468..52734 - 267 WP_224556955.1 Txe/YoeB family addiction module toxin Toxin Detail
LOE45_RS20680 (LOE45_20695) 52731..52982 - 252 WP_224556953.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
LOE45_RS20685 (LOE45_20700) 53614..54525 - 912 Protein_50 IS3 family transposase ISXau3 Transposase
LOE45_RS20690 (LOE45_20705) 54526..55470 - 945 Protein_51 IS110 family transposase ISWpi13 Transposase
LOE45_RS20695 (LOE45_20710) 55636..56127 + 492 WP_224557005.1 3-keto-5-aminohexanoate cleavage protein -
LOE45_RS20700 (LOE45_20715) 56369..56725 + 357 WP_224556951.1 hypothetical protein -
LOE45_RS20705 (LOE45_20720) 56788..58455 + 1668 WP_224556950.1 sulfatase-like hydrolase/transferase -
LOE45_RS20710 (LOE45_20725) 58507..58643 + 137 Protein_55 IS481 family transposase -
LOE45_RS20715 (LOE45_20730) 58631..59764 - 1134 WP_224557003.1 FAD-dependent monooxygenase -
LOE45_RS20720 (LOE45_20735) 59958..63371 - 3414 WP_224556949.1 molybdopterin-dependent oxidoreductase -
LOE45_RS20725 (LOE45_20740) 63368..63880 - 513 WP_224556948.1 (2Fe-2S)-binding protein -
LOE45_RS20730 (LOE45_20745) 64176..64640 + 465 WP_224556946.1 MarR family transcriptional regulator -
LOE45_RS20735 (LOE45_20750) 64648..65316 + 669 WP_224556944.1 HTH-type transcriptional repressor VF
LOE45_RS20740 (LOE45_20755) 65477..66178 + 702 WP_224557001.1 maleate isomerase -
LOE45_RS20745 (LOE45_20760) 66190..66972 + 783 WP_224556941.1 alpha/beta hydrolase -
LOE45_RS20750 (LOE45_20765) 67000..68031 + 1032 WP_224556938.1 leucyl aminopeptidase -
LOE45_RS20755 (LOE45_20770) 68053..68676 + 624 WP_224556935.1 isochorismatase family protein -
LOE45_RS20760 (LOE45_20775) 68793..68978 + 186 WP_224556932.1 hypothetical protein -
LOE45_RS20765 (LOE45_20780) 68975..70456 + 1482 WP_224556929.1 sodium:solute symporter family protein -
LOE45_RS20770 (LOE45_20785) 70837..71055 - 219 WP_224556926.1 4-oxalocrotonate tautomerase family protein -
LOE45_RS20775 (LOE45_20790) 71059..71439 - 381 WP_224556923.1 nuclear transport factor 2 family protein -
LOE45_RS20780 (LOE45_20795) 71436..72047 - 612 WP_224556921.1 glutathione transferase GstA -
LOE45_RS20785 (LOE45_20800) 72148..73035 + 888 WP_224556916.1 LysR family transcriptional regulator -
LOE45_RS20790 (LOE45_20805) 73337..73858 - 522 WP_224556913.1 carbon monoxide dehydrogenase subunit G -
LOE45_RS20795 (LOE45_20810) 73872..74267 - 396 WP_224556911.1 cytochrome c family protein -
LOE45_RS20800 (LOE45_20815) 74438..74545 + 108 WP_224556908.1 pyrroloquinoline quinone precursor peptide PqqA -
LOE45_RS20805 (LOE45_20820) 74559..75446 + 888 WP_224556905.1 pyrroloquinoline quinone biosynthesis protein PqqB -
LOE45_RS20810 (LOE45_20825) 75443..76186 + 744 WP_224556903.1 pyrroloquinoline-quinone synthase PqqC -
LOE45_RS20815 (LOE45_20830) 76186..76464 + 279 WP_224556902.1 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD -
LOE45_RS20820 (LOE45_20835) 76448..77533 + 1086 WP_224556900.1 pyrroloquinoline quinone biosynthesis protein PqqE -
LOE45_RS20825 (LOE45_20840) 77549..78235 + 687 WP_224556898.1 vWA domain-containing protein -
LOE45_RS20830 (LOE45_20845) 78232..79008 - 777 WP_224556896.1 ABC transporter permease -
LOE45_RS20835 (LOE45_20850) 79132..81213 + 2082 WP_224556895.1 4Fe-4S binding protein -
LOE45_RS20840 (LOE45_20855) 81210..82082 + 873 WP_224556893.1 FAD:protein FMN transferase -
LOE45_RS20845 (LOE45_20860) 82147..82929 - 783 WP_224556891.1 xanthine dehydrogenase family protein subunit M -
LOE45_RS20850 (LOE45_20865) 82940..85312 - 2373 WP_224556889.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE45_RS20855 (LOE45_20870) 85334..85819 - 486 WP_224556887.1 (2Fe-2S)-binding protein -
LOE45_RS20860 (LOE45_20875) 85969..86841 - 873 WP_224556997.1 transporter substrate-binding domain-containing protein -
LOE45_RS20865 (LOE45_20880) 86876..87574 - 699 WP_224556885.1 cytochrome c-550 PedF -
LOE45_RS20870 (LOE45_20885) 87764..88894 + 1131 WP_224556882.1 ABC transporter substrate-binding protein -
LOE45_RS20875 (LOE45_20890) 88891..89850 + 960 WP_224556880.1 YVTN family beta-propeller repeat protein -
LOE45_RS20880 (LOE45_20895) 89868..90317 + 450 WP_224556878.1 hypothetical protein -
LOE45_RS20885 (LOE45_20900) 90314..91030 + 717 WP_224556875.1 putative ABC transporter ATP-binding protein YadG VF
LOE45_RS20890 (LOE45_20905) 91027..91818 + 792 WP_224556871.1 ABC transporter permease -
LOE45_RS20895 (LOE45_20910) 91853..92389 + 537 WP_224556869.1 hypothetical protein VF
LOE45_RS20900 (LOE45_20915) 92329..93003 - 675 WP_224556995.1 Taurine import ATP-binding protein TauB VF
LOE45_RS20905 (LOE45_20920) 93009..93986 - 978 WP_224556865.1 ABC transporter substrate-binding protein -
LOE45_RS20910 (LOE45_20925) 94174..95949 + 1776 WP_224556863.1 PQQ-dependent methanol/ethanol family dehydrogenase -
LOE45_RS20915 (LOE45_20930) 96060..96761 + 702 WP_224556861.1 response regulator transcription factor -
LOE45_RS20920 (LOE45_20935) 96948..97994 + 1047 WP_229939099.1 FIST N-terminal domain-containing protein -
LOE45_RS20925 (LOE45_20940) 97991..100213 + 2223 WP_224556857.1 PAS-domain containing protein -
LOE45_RS20930 (LOE45_20945) 100363..100914 - 552 WP_224556854.1 Protein YrdA VF
LOE45_RS20935 (LOE45_20950) 101002..101760 - 759 WP_224556852.1 enoyl-CoA hydratase -
LOE45_RS20940 (LOE45_20955) 101946..102419 - 474 WP_224556849.1 MarR family winged helix-turn-helix transcriptional regulator -
LOE45_RS20945 (LOE45_20960) 102892..103143 + 252 WP_224556848.1 helix-turn-helix domain-containing protein -
LOE45_RS20950 (LOE45_20965) 103143..104477 + 1335 WP_224556846.1 type II toxin-antitoxin system HipA family toxin -
LOE45_RS20955 (LOE45_20970) 104895..105185 - 291 WP_224556843.1 hypothetical protein -
LOE45_RS20960 (LOE45_20975) 105602..106174 - 573 WP_229939138.1 TetR/AcrR family transcriptional regulator -
LOE45_RS20965 (LOE45_20980) 106313..106810 + 498 WP_224556840.1 (2Fe-2S)-binding protein -
LOE45_RS20970 (LOE45_20985) 106807..107862 + 1056 WP_224556839.1 xanthine dehydrogenase family protein subunit M -
LOE45_RS20975 (LOE45_20990) 107855..110101 + 2247 WP_224556838.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE45_RS20980 (LOE45_20995) 110742..112742 - 2001 WP_224556837.1 TonB-dependent siderophore receptor -
LOE45_RS20985 (LOE45_21000) 112910..113740 - 831 WP_224556836.1 putative siderophore transport system ATP-binding protein YusV VF
LOE45_RS20990 (LOE45_21005) 113737..114711 - 975 WP_229939136.1 Iron-uptake system permease protein FeuC VF
LOE45_RS20995 (LOE45_21010) 114780..115781 - 1002 WP_229939097.1 putative siderophore transport system permease protein YfiZ VF
LOE45_RS21000 (LOE45_21015) 115778..116749 - 972 WP_224556833.1 ABC transporter substrate-binding protein -
LOE45_RS21005 (LOE45_21020) 116790..117848 - 1059 WP_224556832.1 siderophore-interacting protein -
LOE45_RS21010 (LOE45_21025) 117999..118958 - 960 WP_224556831.1 LysR family transcriptional regulator -
LOE45_RS21015 (LOE45_21030) 119129..119578 + 450 WP_224556829.1 tripartite tricarboxylate transporter TctB family protein -
LOE45_RS21020 (LOE45_21035) 119586..121121 + 1536 WP_224556827.1 tripartite tricarboxylate transporter permease -
LOE45_RS21025 (LOE45_21040) 121140..122102 + 963 WP_224556825.1 tripartite tricarboxylate transporter substrate binding protein -
LOE45_RS21030 (LOE45_21045) 122190..123392 + 1203 WP_224556823.1 CoA transferase -
LOE45_RS21035 (LOE45_21050) 123445..125676 - 2232 WP_051694640.1 TRAP transporter permease -
LOE45_RS21040 (LOE45_21055) 125673..126179 - 507 WP_051694641.1 DUF1850 domain-containing protein -
LOE45_RS21045 (LOE45_21060) 126179..127156 - 978 WP_037930311.1 TAXI family TRAP transporter solute-binding subunit -
LOE45_RS21050 (LOE45_21065) 127284..128114 + 831 WP_051694642.1 N-formylglutamate deformylase -
LOE45_RS21055 (LOE45_21070) 128111..129538 + 1428 WP_224556820.1 formimidoylglutamate deiminase -
LOE45_RS21060 (LOE45_21075) 129550..130299 + 750 WP_224556817.1 IclR family transcriptional regulator -
LOE45_RS21065 (LOE45_21080) 130339..131322 - 984 WP_037930317.1 HTH-type transcriptional regulator CdhR VF
LOE45_RS21070 (LOE45_21085) 131434..132684 + 1251 WP_224556816.1 sarcosine oxidase subunit beta family protein -
LOE45_RS21075 (LOE45_21090) 132695..132991 + 297 WP_028957964.1 sarcosine oxidase subunit delta -
LOE45_RS21080 (LOE45_21095) 132988..135933 + 2946 WP_224556814.1 sarcosine oxidase subunit alpha family protein -
LOE45_RS21085 (LOE45_21100) 135926..136480 + 555 WP_224556812.1 sarcosine oxidase subunit gamma -
LOE45_RS21090 (LOE45_21105) 136583..137464 + 882 WP_224556810.1 formyltetrahydrofolate deformylase -
LOE45_RS21095 (LOE45_21110) 138060..138983 + 924 WP_224556808.1 zincin-like metallopeptidase domain-containing protein -
LOE45_RS21100 (LOE45_21115) 139088..139477 + 390 WP_224556806.1 DUF3768 domain-containing protein -
LOE45_RS21105 (LOE45_21120) 139681..140712 + 1032 WP_224558028.1 IS110 family transposase ISRhru3 Transposase
LOE45_RS21110 (LOE45_21125) 141176..143158 + 1983 WP_090525078.1 ParB/RepB/Spo0J family partition protein -
LOE45_RS21115 (LOE45_21130) 143232..143792 + 561 WP_224557983.1 regulator -
LOE45_RS21120 (LOE45_21135) 143792..144445 + 654 WP_224557984.1 hypothetical protein -
LOE45_RS21125 (LOE45_21140) 144569..144895 + 327 WP_224557985.1 type II toxin-antitoxin system PrlF family antitoxin -
LOE45_RS21130 (LOE45_21145) 144892..145410 + 519 Protein_139 type II toxin-antitoxin system YhaV family toxin -
LOE45_RS21135 (LOE45_21150) 146333..146557 + 225 WP_108693368.1 transcriptional regulator/antitoxin MazE -
LOE45_RS21140 (LOE45_21155) 146554..146949 + 396 WP_224557987.1 type II toxin-antitoxin system death-on-curing family toxin -
LOE45_RS21145 (LOE45_21160) 147086..147409 + 324 Protein_142 methylase -
LOE45_RS21150 (LOE45_21165) 147511..148620 + 1110 WP_224558030.1 IS110 family transposase ISEc45 Transposase
LOE45_RS21155 (LOE45_21170) 148912..149814 + 903 Protein_144 methyltransferase -
LOE45_RS21160 (LOE45_21175) 150073..150441 - 369 WP_008327368.1 hypothetical protein -
LOE45_RS21165 (LOE45_21180) 150653..150904 + 252 WP_224557941.1 hypothetical protein -
LOE45_RS21170 (LOE45_21185) 150978..151982 - 1005 WP_224557933.1 alpha/beta hydrolase family protein -
LOE45_RS21175 (LOE45_21190) 151995..153686 - 1692 WP_224557934.1 hypothetical protein -
LOE45_RS21180 (LOE45_21195) 153826..154107 + 282 WP_224557935.1 hypothetical protein -
LOE45_RS21185 (LOE45_21200) 154205..154939 + 735 WP_224557936.1 hypothetical protein -
LOE45_RS21190 (LOE45_21205) 155222..156250 + 1029 WP_224557937.1 IS30 family transposase ISRssp4 Transposase
LOE45_RS21195 (LOE45_21210) 156272..156748 - 477 WP_224557938.1 MarR family transcriptional regulator -
LOE45_RS21200 (LOE45_21215) 157200..158006 - 807 WP_051539349.1 Beta-barrel assembly-enhancing protease VF
LOE45_RS21205 (LOE45_21220) 158053..159828 - 1776 WP_224557939.1 pilus assembly protein TadG-related protein -
LOE45_RS21210 (LOE45_21225) 159818..160240 - 423 WP_224557940.1 pilus assembly protein -
LOE45_RS21215 (LOE45_21230) 160237..161187 - 951 WP_229939089.1 type II secretion system F family protein -
LOE45_RS21220 (LOE45_21235) 161189..162157 - 969 WP_229940878.1 hypothetical protein VF
LOE45_RS21225 (LOE45_21240) 162154..163698 - 1545 WP_037925008.1 Putative conjugal transfer protein VF
LOE45_RS21230 (LOE45_21245) 163691..164932 - 1242 WP_224557981.1 hypothetical protein -
LOE45_RS21235 (LOE45_21250) 164954..165493 - 540 WP_224557980.1 CpaD family pilus assembly protein -
LOE45_RS21240 (LOE45_21255) 165576..166850 - 1275 WP_229992505.1 putative type IV piliation system protein VF
LOE45_RS21245 (LOE45_21260) 166872..167792 - 921 WP_229940643.1 Flp pilus assembly protein CpaB -
LOE45_RS21250 (LOE45_21265) 167838..168026 - 189 WP_224558006.1 Flp family type IVb pilin -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance