MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82226 bp
Accession: NZ_CP087015 Location: 1..82226 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-71 Replicon: plasmid P6
Accession: NZ_CP087015 Location: 1..82226 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-71 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE46_RS23380 (LOE46_23385) | 290..1813 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE46_RS23385 (LOE46_23390) | 1943..2899 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE46_RS23390 (LOE46_23395) | 3308..4174 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE46_RS23395 (LOE46_23400) | 4186..4488 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE46_RS23400 (LOE46_23405) | 4578..5510 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE46_RS23405 (LOE46_23410) | 5679..6743 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE46_RS23410 (LOE46_23415) | 6825..8345 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE46_RS23415 (LOE46_23420) | 8358..9554 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE46_RS23420 (LOE46_23425) | 9567..11309 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE46_RS23425 (LOE46_23430) | 11309..12235 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE46_RS23430 (LOE46_23435) | 12272..13189 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE46_RS23435 (LOE46_23440) | 13278..13838 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE46_RS23440 (LOE46_23445) | 13835..14890 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE46_RS23445 (LOE46_23450) | 14887..15765 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE46_RS23450 (LOE46_23455) | 16056..16751 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE46_RS23455 (LOE46_23460) | 16950..18128 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE46_RS23460 (LOE46_23465) | 18128..19444 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE46_RS23465 (LOE46_23470) | 19461..21008 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE46_RS23470 (LOE46_23475) | 21100..21870 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE46_RS23475 (LOE46_23480) | 22339..22614 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE46_RS23480 (LOE46_23485) | 22607..22900 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE46_RS23485 (LOE46_23490) | 22971..23876 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE46_RS23490 (LOE46_23495) | 23887..25626 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE46_RS23495 (LOE46_23500) | 25888..27423 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE46_RS23500 (LOE46_23505) | 27429..28403 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE46_RS23505 (LOE46_23510) | 28467..29681 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE46_RS23510 (LOE46_23515) | 29783..30370 | - | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE46_RS23515 (LOE46_23520) | 30481..30909 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE46_RS23520 (LOE46_23525) | 31140..32069 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE46_RS23525 (LOE46_23530) | 32056..32361 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE46_RS23530 (LOE46_23535) | 32490..32723 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE46_RS23535 (LOE46_23540) | 33062..33880 | + | 819 | Protein_32 | GTP-binding protein | - |
| LOE46_RS23540 (LOE46_23545) | 33959..34546 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE46_RS23545 (LOE46_23550) | 34713..37604 | + | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE46_RS23550 (LOE46_23555) | 37713..38822 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE46_RS23555 (LOE46_23560) | 38819..39748 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE46_RS23560 (LOE46_23565) | 39792..40556 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE46_RS23565 (LOE46_23570) | 40553..42001 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE46_RS23570 (LOE46_23575) | 42032..42349 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE46_RS23575 (LOE46_23580) | 42359..43075 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE46_RS23580 (LOE46_23585) | 43091..43786 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE46_RS23585 (LOE46_23590) | 43779..44564 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE46_RS23590 (LOE46_23595) | 44561..45313 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE46_RS23595 (LOE46_23600) | 45580..46542 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE46_RS23600 (LOE46_23605) | 46628..48502 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE46_RS23605 (LOE46_23610) | 48524..50209 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE46_RS23610 (LOE46_23615) | 50235..51677 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE46_RS23615 (LOE46_23620) | 51701..52330 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE46_RS23620 (LOE46_23625) | 52746..54419 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE46_RS23625 (LOE46_23630) | 54428..55135 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE46_RS23630 (LOE46_23635) | 55274..58000 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE46_RS23635 (LOE46_23640) | 57970..59016 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE46_RS23640 (LOE46_23645) | 59022..60995 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE46_RS23645 (LOE46_23650) | 61156..61719 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE46_RS23650 (LOE46_23655) | 62007..62594 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE46_RS23655 (LOE46_23660) | 62752..64206 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE46_RS23660 (LOE46_23665) | 64248..65573 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE46_RS23665 (LOE46_23670) | 65570..66265 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE46_RS23670 (LOE46_23675) | 66258..67508 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE46_RS23675 (LOE46_23680) | 67699..68319 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE46_RS23680 (LOE46_23685) | 68319..70403 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE46_RS23685 (LOE46_23690) | 70502..71482 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE46_RS23690 (LOE46_23695) | 71479..72681 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE46_RS23695 (LOE46_23700) | 73307..74317 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE46_RS23700 (LOE46_23705) | 74454..75890 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE46_RS23705 (LOE46_23710) | 75887..77476 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE46_RS23710 (LOE46_23715) | 78051..78806 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE46_RS23715 (LOE46_23720) | 78919..79626 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE46_RS23720 (LOE46_23725) | 79623..80309 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|