MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82229 bp
Accession: NZ_CP086968 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P5
Accession: NZ_CP086968 Location: 1..82229 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE11_RS22255 (LOE11_22255) | 1..564 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE11_RS22260 (LOE11_22260) | 725..2698 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE11_RS22265 (LOE11_22265) | 2704..3750 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE11_RS22270 (LOE11_22270) | 3720..6446 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE11_RS22275 (LOE11_22275) | 6585..7292 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE11_RS22280 (LOE11_22280) | 7301..8974 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE11_RS22285 (LOE11_22285) | 9390..10019 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE11_RS22290 (LOE11_22290) | 10043..11485 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE11_RS22295 (LOE11_22295) | 11511..13196 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE11_RS22300 (LOE11_22300) | 13218..15092 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE11_RS22305 (LOE11_22305) | 15178..16140 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE11_RS22310 (LOE11_22310) | 16407..17159 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE11_RS22315 (LOE11_22315) | 17156..17941 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE11_RS22320 (LOE11_22320) | 17934..18629 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE11_RS22325 (LOE11_22325) | 18645..19361 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE11_RS22330 (LOE11_22330) | 19371..19688 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE11_RS22335 (LOE11_22335) | 19719..21167 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE11_RS22340 (LOE11_22340) | 21164..21928 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE11_RS22345 (LOE11_22345) | 21972..22901 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE11_RS22350 (LOE11_22350) | 22898..24040 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE11_RS22355 (LOE11_22355) | 24116..27004 | - | 2889 | Protein_20 | Tn3 family transposase | - |
| LOE11_RS22360 (LOE11_22360) | 27171..27758 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE11_RS22365 (LOE11_22365) | 27837..28655 | - | 819 | Protein_22 | GTP-binding protein | - |
| LOE11_RS22370 (LOE11_22370) | 28994..29227 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE11_RS22375 (LOE11_22375) | 29356..29661 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE11_RS22380 (LOE11_22380) | 29648..30577 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE11_RS22385 (LOE11_22385) | 30808..31236 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE11_RS22390 (LOE11_22390) | 31296..31934 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE11_RS22395 (LOE11_22395) | 32036..33250 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE11_RS22400 (LOE11_22400) | 33314..34288 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE11_RS22405 (LOE11_22405) | 34294..35829 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE11_RS22410 (LOE11_22410) | 36091..37830 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE11_RS22415 (LOE11_22415) | 37841..38746 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE11_RS22420 (LOE11_22420) | 38817..39110 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE11_RS22425 (LOE11_22425) | 39103..39378 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE11_RS22430 (LOE11_22430) | 39847..40617 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE11_RS22435 (LOE11_22435) | 40709..42256 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE11_RS22440 (LOE11_22440) | 42273..43589 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE11_RS22445 (LOE11_22445) | 43589..44767 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE11_RS22450 (LOE11_22450) | 44966..45661 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE11_RS22455 (LOE11_22455) | 45952..46830 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE11_RS22460 (LOE11_22460) | 46827..47882 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE11_RS22465 (LOE11_22465) | 47879..48439 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE11_RS22470 (LOE11_22470) | 48528..49445 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE11_RS22475 (LOE11_22475) | 49482..50408 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE11_RS22480 (LOE11_22480) | 50408..52150 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE11_RS22485 (LOE11_22485) | 52163..53359 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE11_RS22490 (LOE11_22490) | 53372..54892 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE11_RS22495 (LOE11_22495) | 54974..56038 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE11_RS22500 (LOE11_22500) | 56207..57139 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE11_RS22505 (LOE11_22505) | 57229..57531 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE11_RS22510 (LOE11_22510) | 57543..58409 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE11_RS22515 (LOE11_22515) | 58818..59774 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE11_RS22520 (LOE11_22520) | 59904..61427 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE11_RS22525 (LOE11_22525) | 61596..63431 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE11_RS22530 (LOE11_22530) | 63640..64326 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE11_RS22535 (LOE11_22535) | 64323..65030 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE11_RS22540 (LOE11_22540) | 65143..65898 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE11_RS22545 (LOE11_22545) | 66473..68062 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE11_RS22550 (LOE11_22550) | 68059..69495 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE11_RS22555 (LOE11_22555) | 69632..70642 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE11_RS22560 (LOE11_22560) | 71268..72470 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE11_RS22565 (LOE11_22565) | 72467..73447 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE11_RS22570 (LOE11_22570) | 73546..75630 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE11_RS22575 (LOE11_22575) | 75630..76250 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE11_RS22580 (LOE11_22580) | 76441..77691 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE11_RS22585 (LOE11_22585) | 77684..78379 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE11_RS22590 (LOE11_22590) | 78376..79701 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE11_RS22595 (LOE11_22595) | 79743..81197 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE11_RS22600 (LOE11_22600) | 81355..81942 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|