MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086965 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P2
Accession: NZ_CP086965 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE11_RS20020 (LOE11_20020) | 1..273 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE11_RS20025 (LOE11_20025) | 361..750 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE11_RS20030 (LOE11_20030) | 965..1996 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE11_RS20035 (LOE11_20035) | 2464..4446 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE11_RS20040 (LOE11_20040) | 4519..5211 | + | 693 | WP_224557484.1 | regulator | - |
| LOE11_RS20045 (LOE11_20045) | 5211..5864 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE11_RS20050 (LOE11_20050) | 5988..6314 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE11_RS20055 (LOE11_20055) | 6311..6828 | + | 518 | Protein_7 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE11_RS20060 (LOE11_20060) | 7367..7648 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE11_RS20065 (LOE11_20065) | 7867..8996 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE11_RS20070 (LOE11_20070) | 9023..9415 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE11_RS20075 (LOE11_20075) | 9596..10417 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE11_RS20080 (LOE11_20080) | 10414..11454 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE11_RS20085 (LOE11_20085) | 11451..12386 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE11_RS20090 (LOE11_20090) | 12391..13179 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE11_RS20095 (LOE11_20095) | 13218..14219 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE11_RS20100 (LOE11_20100) | 14317..15171 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE11_RS20105 (LOE11_20105) | 15204..16058 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE11_RS20110 (LOE11_20110) | 16066..16872 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE11_RS20115 (LOE11_20115) | 16865..17665 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE11_RS20120 (LOE11_20120) | 17662..18720 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE11_RS20125 (LOE11_20125) | 18713..19585 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE11_RS20130 (LOE11_20130) | 19612..20778 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE11_RS20135 (LOE11_20135) | 20833..21519 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE11_RS20140 (LOE11_20140) | 21509..21835 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE11_RS20145 (LOE11_20145) | 21832..22599 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE11_RS20150 (LOE11_20150) | 22665..23180 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE11_RS20155 (LOE11_20155) | 23177..24463 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE11_RS20160 (LOE11_20160) | 24492..25694 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE11_RS20165 (LOE11_20165) | 25857..26357 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE11_RS20170 (LOE11_20170) | 26677..27843 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE11_RS20175 (LOE11_20175) | 27840..29843 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE11_RS20180 (LOE11_20180) | 29840..30634 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE11_RS20185 (LOE11_20185) | 30644..32242 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE11_RS20190 (LOE11_20190) | 32322..32936 | - | 615 | Protein_34 | IS21 family transposase ISPve1 | Transposase |
| LOE11_RS20195 (LOE11_20195) | 32933..34378 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE11_RS20200 (LOE11_20200) | 34539..34817 | - | 279 | Protein_36 | transposase | - |
| LOE11_RS20205 (LOE11_20205) | 35106..35873 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE11_RS20210 (LOE11_20210) | 35909..36625 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE11_RS20215 (LOE11_20215) | 37604..38533 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE11_RS20220 (LOE11_20220) | 39072..39278 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE11_RS20225 (LOE11_20225) | 39831..40388 | + | 558 | WP_224557513.1 | transposase | - |
| LOE11_RS20230 (LOE11_20230) | 40375..42708 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE11_RS20235 (LOE11_20235) | 42717..44717 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE11_RS20240 (LOE11_20240) | 44835..45617 | - | 783 | Protein_44 | LysR family transcriptional regulator | - |
| LOE11_RS20245 (LOE11_20245) | 45601..46251 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE11_RS20250 (LOE11_20250) | 46299..47657 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE11_RS20255 (LOE11_20255) | 47669..49132 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE11_RS20260 (LOE11_20260) | 49427..49849 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE11_RS20265 (LOE11_20265) | 50048..50248 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE11_RS20270 (LOE11_20270) | 50389..52896 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE11_RS20275 (LOE11_20275) | 52916..53335 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE11_RS20280 (LOE11_20280) | 53459..54331 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE11_RS20285 (LOE11_20285) | 54354..55118 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE11_RS20290 (LOE11_20290) | 55219..55959 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE11_RS20295 (LOE11_20295) | 55956..56447 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE11_RS20300 (LOE11_20300) | 56444..56644 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE11_RS20305 (LOE11_20305) | 56786..57751 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE11_RS20310 (LOE11_20310) | 57741..58496 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE11_RS20315 (LOE11_20315) | 58593..59171 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE11_RS20320 (LOE11_20320) | 59275..59703 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE11_RS20325 (LOE11_20325) | 59911..60477 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE11_RS20330 (LOE11_20330) | 60483..60905 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE11_RS20335 (LOE11_20335) | 60902..61561 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE11_RS20340 (LOE11_20340) | 61585..62052 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE11_RS20345 (LOE11_20345) | 62052..62678 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE11_RS20350 (LOE11_20350) | 62675..64048 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE11_RS20355 (LOE11_20355) | 64052..64507 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE11_RS20360 (LOE11_20360) | 64520..65302 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE11_RS20365 (LOE11_20365) | 65331..65789 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE11_RS20370 (LOE11_20370) | 65756..67369 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE11_RS20375 (LOE11_20375) | 67360..67527 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE11_RS20380 (LOE11_20380) | 67588..69489 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE11_RS20385 (LOE11_20385) | 69486..70487 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE11_RS20390 (LOE11_20390) | 70707..71219 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE11_RS20395 (LOE11_20395) | 71402..71668 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE11_RS20400 (LOE11_20400) | 71703..74057 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE11_RS20405 (LOE11_20405) | 74240..74524 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE11_RS20410 (LOE11_20410) | 74572..75234 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE11_RS20415 (LOE11_20415) | 75526..75978 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE11_RS20420 (LOE11_20420) | 76040..76534 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE11_RS20425 (LOE11_20425) | 76534..77463 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE11_RS20430 (LOE11_20430) | 77481..78926 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE11_RS20435 (LOE11_20435) | 79088..79537 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE11_RS20440 (LOE11_20440) | 79532..79984 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE11_RS20445 (LOE11_20445) | 80311..81309 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE11_RS20450 (LOE11_20450) | 81306..82487 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE11_RS20455 (LOE11_20455) | 82815..83813 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE11_RS20460 (LOE11_20460) | 83974..85608 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE11_RS20465 (LOE11_20465) | 85625..86491 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE11_RS20470 (LOE11_20470) | 87515..88126 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE11_RS20475 (LOE11_20475) | 88174..89058 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE11_RS20480 (LOE11_20480) | 89185..90324 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE11_RS20485 (LOE11_20485) | 90426..90917 | + | 492 | Protein_93 | recombinase family protein | - |
| LOE11_RS20490 (LOE11_20490) | 90996..91391 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE11_RS20495 (LOE11_20495) | 91381..91608 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE11_RS20500 (LOE11_20500) | 91817..93010 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE11_RS20505 (LOE11_20505) | 92994..93926 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE11_RS20510 (LOE11_20510) | 94140..95351 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE11_RS20515 (LOE11_20515) | 95520..97281 | + | 1762 | Protein_99 | ParB N-terminal domain-containing protein | - |
| LOE11_RS20520 (LOE11_20520) | 97438..98805 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE11_RS20525 (LOE11_20525) | 98802..99461 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE11_RS20530 (LOE11_20530) | 99607..99924 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE11_RS20535 (LOE11_20535) | 99881..101266 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE11_RS20540 (LOE11_20540) | 101447..101827 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE11_RS20545 (LOE11_20545) | 101863..102333 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE11_RS20550 (LOE11_20550) | 102345..104552 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE11_RS20555 (LOE11_20555) | 104533..105513 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE11_RS20560 (LOE11_20560) | 105519..107426 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE11_RS20565 (LOE11_20565) | 107423..108124 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE11_RS20570 (LOE11_20570) | 108260..108421 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE11_RS20575 (LOE11_20575) | 108450..108743 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE11_RS20580 (LOE11_20580) | 109096..109566 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE11_RS20585 (LOE11_20585) | 109607..110545 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|