MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157666 bp
Accession: NZ_CP086964 Location: 1..157666 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P1
Accession: NZ_CP086964 Location: 1..157666 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-15 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE11_RS19220 (LOE11_19220) | 1..3339 | - | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE11_RS19225 (LOE11_19225) | 3544..4431 | + | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE11_RS19230 (LOE11_19230) | 4873..6075 | + | 1203 | WP_089852475.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE11_RS19235 (LOE11_19235) | 6065..7024 | + | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE11_RS19240 (LOE11_19240) | 7264..8421 | + | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE11_RS19245 (LOE11_19245) | 8487..9530 | + | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE11_RS19250 (LOE11_19250) | 9821..11998 | + | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE11_RS19255 (LOE11_19255) | 12098..12571 | + | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE11_RS19260 (LOE11_19260) | 12955..13119 | + | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE11_RS19265 (LOE11_19265) | 13358..14803 | + | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE11_RS19270 (LOE11_19270) | 14813..15100 | - | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE11_RS19275 (LOE11_19275) | 15520..15924 | + | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE11_RS19280 (LOE11_19280) | 15979..16575 | - | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE11_RS19285 (LOE11_19285) | 16615..17520 | + | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE11_RS19290 (LOE11_19290) | 17658..18857 | + | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE11_RS19295 (LOE11_19295) | 18985..19425 | + | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE11_RS19300 (LOE11_19300) | 19535..20053 | + | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE11_RS19305 (LOE11_19305) | 20157..20648 | + | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE11_RS19310 (LOE11_19310) | 20659..21036 | + | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE11_RS19315 (LOE11_19315) | 21038..21235 | + | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE11_RS19320 (LOE11_19320) | 21311..21730 | + | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE11_RS19325 (LOE11_19325) | 21723..22367 | + | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE11_RS19330 (LOE11_19330) | 22426..22827 | + | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE11_RS19335 (LOE11_19335) | 22824..23525 | + | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE11_RS19340 (LOE11_19340) | 24048..24341 | - | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE11_RS19345 (LOE11_19345) | 24518..24898 | + | 381 | Protein_25 | hypothetical protein | - |
| LOE11_RS19350 (LOE11_19350) | 25000..26109 | + | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE11_RS19355 (LOE11_19355) | 26335..29004 | + | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE11_RS19360 (LOE11_19360) | 28981..29427 | - | 447 | Protein_28 | IS6 family transposase | - |
| LOE11_RS19365 (LOE11_19365) | 29497..30087 | + | 591 | WP_052418560.1 | LysR substrate-binding domain-containing protein | - |
| LOE11_RS19370 (LOE11_19370) | 30118..31038 | + | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE11_RS19375 (LOE11_19375) | 31187..32185 | + | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE11_RS19380 (LOE11_19380) | 32251..32796 | + | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE11_RS19385 (LOE11_19385) | 32796..34076 | + | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE11_RS19390 (LOE11_19390) | 34066..35409 | + | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE11_RS19395 (LOE11_19395) | 35406..35900 | + | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE11_RS19400 (LOE11_19400) | 35897..37132 | + | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE11_RS19405 (LOE11_19405) | 37143..37628 | + | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE11_RS19410 (LOE11_19410) | 37625..38854 | + | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE11_RS19415 (LOE11_19415) | 38864..39781 | + | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE11_RS19425 (LOE11_19425) | 40671..41302 | - | 632 | Protein_41 | IS3 family transposase ISPko4 | Transposase |
| LOE11_RS19430 (LOE11_19430) | 41363..41782 | + | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE11_RS19435 (LOE11_19435) | 41983..42702 | - | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE11_RS19440 (LOE11_19440) | 42859..43719 | + | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE11_RS19445 (LOE11_19445) | 44074..45093 | - | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE11_RS19450 (LOE11_19450) | 45219..45644 | + | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE11_RS19455 (LOE11_19455) | 45719..46684 | - | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE11_RS19460 (LOE11_19460) | 46681..48018 | - | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE11_RS19465 (LOE11_19465) | 48015..48497 | - | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE11_RS19470 (LOE11_19470) | 48634..49185 | + | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE11_RS19475 (LOE11_19475) | 49187..49759 | + | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE11_RS19480 (LOE11_19480) | 49768..50247 | + | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE11_RS19485 (LOE11_19485) | 50244..50771 | + | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE11_RS19490 (LOE11_19490) | 50768..51292 | + | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE11_RS19495 (LOE11_19495) | 51316..52287 | + | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE11_RS19500 (LOE11_19500) | 52284..54584 | + | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE11_RS19505 (LOE11_19505) | 54581..55117 | + | 537 | WP_229940780.1 | hypothetical protein | - |
| LOE11_RS19510 (LOE11_19510) | 55114..55326 | + | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE11_RS19515 (LOE11_19515) | 55329..56253 | - | 925 | Protein_59 | IS5 family transposase ISUnCu15 | Transposase |
| LOE11_RS19520 (LOE11_19520) | 56573..57601 | - | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE11_RS19525 (LOE11_19525) | 57885..60113 | - | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE11_RS19530 (LOE11_19530) | 60110..61135 | - | 1026 | WP_229942672.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE11_RS19535 (LOE11_19535) | 61645..63007 | + | 1363 | WP_229939207.1 | IS3 family transposase ISPko4 | Transposase |
| LOE11_RS19540 (LOE11_19540) | 63110..63910 | + | 801 | WP_284145095.1 | zinc-binding dehydrogenase | - |
| LOE11_RS19545 (LOE11_19545) | 63929..64459 | - | 531 | WP_224557955.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE11_RS19550 (LOE11_19550) | 64523..67990 | + | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE11_RS19555 (LOE11_19555) | 68089..69099 | + | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE11_RS19560 (LOE11_19560) | 69482..70641 | + | 1160 | WP_224557952.1 | IS3 family transposase ISOba2 | Transposase |
| LOE11_RS19565 (LOE11_19565) | 70665..70862 | - | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE11_RS19570 (LOE11_19570) | 70917..72302 | - | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE11_RS19575 (LOE11_19575) | 72329..72910 | - | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE11_RS19580 (LOE11_19580) | 73029..73691 | - | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE11_RS19585 (LOE11_19585) | 73752..74078 | - | 327 | Protein_73 | DEAD/DEAH box helicase family protein | - |
| LOE11_RS19590 (LOE11_19590) | 74254..75708 | - | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE11_RS19595 (LOE11_19595) | 75888..76946 | - | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE11_RS19600 (LOE11_19600) | 76943..79693 | - | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE11_RS19605 (LOE11_19605) | 79690..80112 | - | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE11_RS19610 (LOE11_19610) | 80116..80364 | - | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE11_RS19615 (LOE11_19615) | 80512..81501 | - | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE11_RS19620 (LOE11_19620) | 81612..83069 | - | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE11_RS19625 (LOE11_19625) | 83072..83803 | - | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE11_RS19630 (LOE11_19630) | 83807..84451 | - | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE11_RS19635 (LOE11_19635) | 84454..85455 | - | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE11_RS19640 (LOE11_19640) | 85455..85943 | - | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE11_RS19645 (LOE11_19645) | 85947..86756 | - | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE11_RS19650 (LOE11_19650) | 86746..87834 | - | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE11_RS19655 (LOE11_19655) | 88000..90258 | - | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE11_RS19660 (LOE11_19660) | 90359..90634 | - | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE11_RS19665 (LOE11_19665) | 90658..90942 | - | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE11_RS19670 (LOE11_19670) | 90939..91520 | - | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE11_RS19675 (LOE11_19675) | 91570..91911 | - | 342 | WP_224557973.1 | hypothetical protein | - |
| LOE11_RS19680 (LOE11_19680) | 92109..92378 | + | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE11_RS19685 (LOE11_19685) | 92464..93117 | + | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE11_RS19690 (LOE11_19690) | 93338..94495 | + | 1158 | WP_229942671.1 | replication initiation protein RepC | - |
| LOE11_RS19695 (LOE11_19695) | 94750..95415 | + | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE11_RS19700 (LOE11_19700) | 95499..95768 | - | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE11_RS19705 (LOE11_19705) | 95786..96376 | - | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE11_RS19710 (LOE11_19710) | 96485..97042 | - | 558 | WP_040652314.1 | methyltransferase | - |
| LOE11_RS19715 (LOE11_19715) | 97035..97943 | - | 909 | Protein_99 | cation diffusion facilitator family transporter | - |
| LOE11_RS19720 (LOE11_19720) | 97933..98703 | - | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE11_RS19725 (LOE11_19725) | 98790..99407 | - | 618 | WP_024099354.1 | cation transporter | - |
| LOE11_RS19730 (LOE11_19730) | 99521..99847 | - | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE11_RS19735 (LOE11_19735) | 99844..100272 | - | 429 | WP_224557734.1 | IS607 family transposase ISChh1 | Transposase |
| LOE11_RS19740 (LOE11_19740) | 100520..101059 | + | 540 | WP_223865966.1 | SCO family protein | - |
| LOE11_RS19745 (LOE11_19745) | 101056..101499 | + | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE11_RS19750 (LOE11_19750) | 101496..102158 | + | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE11_RS19755 (LOE11_19755) | 102229..102660 | + | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE11_RS19760 (LOE11_19760) | 102672..103292 | + | 621 | WP_224557759.1 | SCO family protein | - |
| LOE11_RS19765 (LOE11_19765) | 103322..104638 | + | 1317 | WP_229940656.1 | M23 family metallopeptidase | - |
| LOE11_RS19770 (LOE11_19770) | 104659..105111 | + | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE11_RS19775 (LOE11_19775) | 105122..105904 | + | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE11_RS19780 (LOE11_19780) | 105908..106384 | + | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE11_RS19785 (LOE11_19785) | 106391..107926 | + | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE11_RS19790 (LOE11_19790) | 107923..108087 | + | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE11_RS19795 (LOE11_19795) | 108113..108613 | - | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE11_RS19800 (LOE11_19800) | 108675..111026 | - | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE11_RS19805 (LOE11_19805) | 111243..113570 | + | 2328 | WP_111550081.1 | Copper-transporting P-type ATPase | VF |
| LOE11_RS19810 (LOE11_19810) | 114058..114495 | + | 438 | WP_224557737.1 | FixH family protein | - |
| LOE11_RS19815 (LOE11_19815) | 114492..115928 | + | 1437 | WP_067293091.1 | Cation efflux system protein CusB | VF |
| LOE11_RS19820 (LOE11_19820) | 115925..119080 | + | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE11_RS19825 (LOE11_19825) | 119124..120365 | - | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE11_RS19830 (LOE11_19830) | 120462..120920 | - | 459 | WP_037929563.1 | cytochrome c | - |
| LOE11_RS19835 (LOE11_19835) | 120917..122221 | - | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE11_RS19840 (LOE11_19840) | 122230..122763 | - | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE11_RS19845 (LOE11_19845) | 122873..123589 | - | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE11_RS19850 (LOE11_19850) | 123636..124994 | - | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE11_RS19855 (LOE11_19855) | 125006..126466 | - | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE11_RS19860 (LOE11_19860) | 126466..126687 | - | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE11_RS19865 (LOE11_19865) | 126761..127177 | - | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE11_RS19870 (LOE11_19870) | 127350..127559 | - | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE11_RS19875 (LOE11_19875) | 127698..130205 | + | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE11_RS19880 (LOE11_19880) | 130225..130644 | + | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE11_RS19885 (LOE11_19885) | 130752..131621 | + | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE11_RS19890 (LOE11_19890) | 131683..132408 | + | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE11_RS19895 (LOE11_19895) | 132495..133604 | + | 1110 | WP_224557743.1 | permease | - |
| LOE11_RS19900 (LOE11_19900) | 133601..134341 | - | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE11_RS19905 (LOE11_19905) | 134338..134829 | - | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE11_RS19910 (LOE11_19910) | 134826..135530 | - | 705 | WP_037929522.1 | SCO family protein | - |
| LOE11_RS19915 (LOE11_19915) | 135530..135820 | - | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE11_RS19920 (LOE11_19920) | 135903..136415 | - | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE11_RS19925 (LOE11_19925) | 136412..137008 | - | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE11_RS19930 (LOE11_19930) | 137005..137430 | - | 426 | WP_224557746.1 | cytochrome c | - |
| LOE11_RS23050 | 137580..137714 | - | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE11_RS19935 (LOE11_19935) | 137781..138236 | - | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE11_RS19940 (LOE11_19940) | 138277..139716 | - | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE11_RS19945 (LOE11_19945) | 139807..140160 | - | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE11_RS19950 (LOE11_19950) | 140372..140995 | - | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE11_RS19955 (LOE11_19955) | 141013..141741 | - | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE11_RS19960 (LOE11_19960) | 142243..142503 | + | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE11_RS19965 (LOE11_19965) | 142512..143831 | + | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE11_RS19970 (LOE11_19970) | 144005..144964 | - | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE11_RS19975 (LOE11_19975) | 145566..146087 | - | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE11_RS19980 (LOE11_19980) | 146100..146963 | - | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE11_RS19985 (LOE11_19985) | 146981..148912 | - | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE11_RS19990 (LOE11_19990) | 149226..150983 | + | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE11_RS19995 (LOE11_19995) | 151284..152918 | + | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE11_RS20000 (LOE11_20000) | 152935..153802 | + | 868 | Protein_157 | TniB family NTP-binding protein | - |
| LOE11_RS20005 (LOE11_20005) | 154826..155422 | - | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE11_RS20010 (LOE11_20010) | 155426..156310 | - | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE11_RS20015 (LOE11_20015) | 156469..157563 | + | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|