MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37724 bp
Accession: NZ_CP086935 Location: 1..37724 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-30 Replicon: plasmid P5
Accession: NZ_CP086935 Location: 1..37724 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-30 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE16_RS21960 (LOE16_21950) | 581..2131 | + | 1551 | WP_224557648.1 | AMP-binding protein | - |
| LOE16_RS21965 (LOE16_21955) | 2141..3640 | + | 1500 | WP_224557647.1 | AMP-binding protein | - |
| LOE16_RS21970 (LOE16_21960) | 3665..4846 | + | 1182 | WP_224557646.1 | lipid-transfer protein | - |
| LOE16_RS21975 (LOE16_21965) | 4861..5652 | + | 792 | WP_224557645.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LOE16_RS21980 (LOE16_21970) | 5914..6279 | + | 366 | WP_224557644.1 | MerR family transcriptional regulator | - |
| LOE16_RS21985 (LOE16_21975) | 6740..7612 | - | 873 | WP_224557643.1 | LysR family transcriptional regulator | - |
| LOE16_RS21990 (LOE16_21980) | 7773..8492 | + | 720 | WP_229940890.1 | hypothetical protein | - |
| LOE16_RS21995 (LOE16_21985) | 8649..9248 | - | 600 | WP_012187123.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE16_RS22000 (LOE16_21990) | 9429..10880 | + | 1452 | WP_229940892.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE16_RS22005 (LOE16_21995) | 10877..11701 | + | 825 | WP_224557641.1 | AAA family ATPase | - |
| LOE16_RS22010 (LOE16_22000) | 11833..12462 | + | 630 | WP_224557677.1 | IS91 family transposase ISMno23 | Transposase |
| LOE16_RS22015 (LOE16_22005) | 12525..12709 | + | 185 | Protein_12 | WGR domain-containing protein | - |
| LOE16_RS22020 (LOE16_22010) | 12873..13754 | + | 882 | WP_224557676.1 | hypothetical protein | - |
| LOE16_RS22025 (LOE16_22015) | 13747..14676 | + | 930 | WP_224557674.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LOE16_RS22030 (LOE16_22020) | 14680..17868 | + | 3189 | WP_224557672.1 | N-6 DNA methylase | - |
| LOE16_RS22035 (LOE16_22025) | 18111..18875 | + | 765 | WP_229940891.1 | Bro-N domain-containing protein | - |
| LOE16_RS22040 (LOE16_22030) | 19050..19934 | - | 885 | WP_224557668.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE16_RS22045 (LOE16_22035) | 20369..20983 | - | 615 | WP_224557666.1 | hypothetical protein | - |
| LOE16_RS22050 (LOE16_22040) | 21411..21803 | - | 393 | WP_224557664.1 | hypothetical protein | - |
| LOE16_RS22055 (LOE16_22045) | 22532..23113 | - | 582 | Protein_20 | Mobilization protein A | Relaxase |
| LOE16_RS22060 (LOE16_22050) | 23348..23635 | + | 288 | WP_224557660.1 | hypothetical protein | - |
| LOE16_RS22065 (LOE16_22055) | 23632..25476 | + | 1845 | WP_224557659.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE16_RS22070 (LOE16_22060) | 25691..26725 | + | 1035 | WP_151654626.1 | replication initiator protein A | - |
| LOE16_RS22075 (LOE16_22065) | 26840..27508 | + | 669 | WP_151654624.1 | Protein virC1 | VF |
| LOE16_RS22080 (LOE16_22075) | 28376..29419 | + | 1044 | WP_224557657.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE16_RS22085 (LOE16_22080) | 29662..29928 | - | 267 | WP_224557656.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LOE16_RS22090 (LOE16_22085) | 29925..30176 | - | 252 | WP_036743750.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LOE16_RS22095 (LOE16_22090) | 30283..30969 | - | 687 | WP_224557655.1 | helix-turn-helix transcriptional regulator | - |
| LOE16_RS22100 (LOE16_22095) | 31141..32205 | - | 1065 | WP_224557654.1 | AraC family transcriptional regulator | - |
| LOE16_RS22105 (LOE16_22100) | 32543..33724 | + | 1182 | WP_229940888.1 | ABC transporter substrate-binding protein | - |
| LOE16_RS22110 (LOE16_22105) | 33743..34654 | + | 912 | WP_229940889.1 | branched-chain amino acid ABC transporter permease | - |
| LOE16_RS22115 (LOE16_22110) | 34651..35607 | + | 957 | WP_224557652.1 | branched-chain amino acid ABC transporter permease | - |
| LOE16_RS22120 (LOE16_22115) | 35604..36353 | + | 750 | WP_224557651.1 | ABC transporter ATP-binding protein | - |
| LOE16_RS22125 (LOE16_22120) | 36350..37051 | + | 702 | WP_224557650.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|